Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01751 AAAGGATTAACTGAAGTTTTATTTGTGCTTTTGTTCTTGTCTGGTAATAAACACAAGGGTACAAGTAGAAGTGTGAGGAAGAGATTTCTTTCCCAACTCAAGAGTTGTTTGCTCTGTCAATGCCAGTGCCAGCCCGAGTTTATCGAGACTGGCCTCTATGCAACAGTTGATTTAGATAAGGCAAGAGTAGGAAGGACTAGCCTGCTAAAGCAGCCAACCTCCAACCCCACTTGGAACGAGACCTTCCACATATACTGTGCCCATTTCATATCCCATGTTATATTCACTATCAAACAAAAAGACCCAATTGATGCAACTCTAATTGGAAGAGCTTATGTCCCAGTTGAGAAAGTTGTGAATGGCAACATAGTGGATACATGGGTTCGAATATTAGACGAGGATCATAACCCCTTACCAAGTGACTCTAAAATCCATGTCAGAATGCAATTCTCTGATGCTAGGAATGACATGAATTGGTCTCAAGGAATAAGGAGTCCCCGGTTTGAAGGAGTTCCCCGCACTTTCTTTAGTCAAAAAAAAGGTTGCAAAGTTACTTTGTACCAAGATGCCCATGTTTCAGATGGTTTTGTGCCATGGATCCTCTTATCAGGAGAAAAGCCTTATGAGCATAGGAAATGTTGGGAGGATATTTATAATGCCATTATGGACGCTAGATACTTTATTTACATAACTGGTTGGTCTGTCTACACTGAAATAGCCTTGGTTAGGGACCCATGGAAGCCTAGAACAACTACCCTTGGGGAATTGCTCAAGATGAAAGCTCAGGAAGGGGTTGTGGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTGCCAGAGTTCAAGAAAGATGGCTTGATGGCAACCCATGATCAAGAAACTGCTGTTTACTTCCAAAACACAAAAGTGAAATGTGTTTTGTGTCCGCGGAACCCGGATGAAGGAAGAAGCTTAGCTCAAGGTTTTGAAATTTCCACAATGTTCACTCATCACCAAAAGACTATAGTTGTTGACAGCCAAGTTGTTGGTGCAGCTATGGGACAAGCCCAAAAGAGAACTATAGTAAGTTTTGTAGGTGGCATTGATCTTTGTGATGGGAGGTATGATACTCAGGAACATCCACTATTTTCAACTTTGGATACAGTACATAAAGATGATTTCCATCAGCCAAATTTCCCAGATGCTTCCATCAAGAAAGGTGGCCCAAGAGAGCCATGGCATGACATTCACTGCAAGTTAGAAGGGTCTGTTGCTTGGGATGTTTTGGAAAATTTTCGGCAAAGGTGGGAGAAGCAGGTAGGCAGTCAGCTCTTATTCCCTTCAAGCAAGCTTAATCAATACTTTGTCCCTCAATCCACTGTGGCATCAACAGATGAAAATGAGACATGGAATGTTCAGTTGTTCAGATCCATTGATGGTGGTGCAGCTTCTGGCTTCCCCCACCCAGAAGCTGCGGCTGAATTTGGCCTTGTTAGTGGGAAAGATAATATCATTGACAGAAGCATTCAAGATGCTTATATAAATGCTATTCGACGAGCCAAAAACTTCATCTACATTGAAAACCAATATTTCCTAGGGAGTTCATATGGTTGGCAAGCATCTGATATTGTAGTTGAGGATATTGGTGCTTTGCATCTTATACCAAAGGAGCTATCATTGAAGATTGTTAGCAAGATTGAAGCAGGAGAGAGGTTTTCAGTGTATGTAGTTATACCAATGTGGCCAGAAGGCATACCTGAGAGTGGTTCAGTTCAAGCAATATTAGACTGGCAAAGGAGAACAATGGAGATGATGTATGCTGATATAGCTAAAGCCATTCGGAGAAAAGGAATTGAAGCCAACCCAAGGGACTACTTGACCTTTTTCTGCCTTGGAAACCGTGAGGGTAACAAGGATAGGGAATATACTCCTACTGAAGCACCAGAGCCTGATAGTGATTATGGTAGAGCACAAAAGTCTAGGCGATTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATCATAATTGGTTCTGCCAACATAAATCAAAGATCAATGGACGGAGCAAGAGACACTGAGATTGCAATGGGTGCATTCCAACCACGTCATTTAGGATGTAATGGGCTACCAAGAGGACAAATATATGGATTTCGACGTGCACTATGGTATGAACACCTAGGTAATCTTCATGATACAAGGATCTTTGATAATCCAGAAAGTGTGGACTGCATCAGGTTTGTGAATCATCTTGCTGAAACCAACTGGGACATGTTCTCTAAGGAAACTTTTGATGAGTATAGAGAATTTCACCACCTCATGCGCTATCCTATAGAAATAACCAACAATGGAGGCATAACAATCCTTCCAGGGCTAGAACATTTTCCTGACACCAATGCTAAGATTTTGGGTTCCAGATCAGATTACCTTCCTCCAATTCTCACTACTTAATTAGCTTCTGCTACTTTACTGTCAAGGCAACTACCACAACTTATTAAGGGATAAAAATTAATTTAAAAAGTTAAACCATGTAATACTTGTTGGGAAGAAGTTGGTGAA 2550 0.4122 KGLTEVLFVLLFLSGNKHKGTSRSVRKRFLSQLKSCLLCQCQCQPEFIETGLYATVDLDKARVGRTSLLKQPTSNPTWNETFHIYCAHFISHVIFTIKQKDPIDATLIGRAYVPVEKVVNGNIVDTWVRILDEDHNPLPSDSKIHVRMQFSDARNDMNWSQGIRSPRFEGVPRTFFSQKKGCKVTLYQDAHVSDGFVPWILLSGEKPYEHRKCWEDIYNAIMDARYFIYITGWSVYTEIALVRDPWKPRTTTLGELLKMKAQEGVVVLMLVWDDRTSVPEFKKDGLMATHDQETAVYFQNTKVKCVLCPRNPDEGRSLAQGFEISTMFTHHQKTIVVDSQVVGAAMGQAQKRTIVSFVGGIDLCDGRYDTQEHPLFSTLDTVHKDDFHQPNFPDASIKKGGPREPWHDIHCKLEGSVAWDVLENFRQRWEKQVGSQLLFPSSKLNQYFVPQSTVASTDENETWNVQLFRSIDGGAASGFPHPEAAAEFGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWQASDIVVEDIGALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGIPESGSVQAILDWQRRTMEMMYADIAKAIRRKGIEANPRDYLTFFCLGNREGNKDREYTPTEAPEPDSDYGRAQKSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAFQPRHLGCNGLPRGQIYGFRRALWYEHLGNLHDTRIFDNPESVDCIRFVNHLAETNWDMFSKETFDEYREFHHLMRYPIEITNNGGITILPGLEHFPDTNAKILGSRSDYLPPILTT 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01751 813 PIRSF PLD_plant 11 813 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pste2g01751 813 Pfam Phospholipase D Active site motif 657 683 IPR001736 GO:0003824
Pste2g01751 813 Pfam Phospholipase D Active site motif 326 367 IPR001736 GO:0003824
Pste2g01751 813 Pfam C2 domain 52 129 IPR000008 -
Pste2g01751 813 CDD C2_plant_PLD 28 150 - -
Pste2g01751 813 FunFam Phospholipase D delta 204 447 - -
Pste2g01751 813 Gene3D Endonuclease Chain A 202 461 - -
Pste2g01751 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 367 IPR001736 GO:0003824
Pste2g01751 813 Pfam Phospholipase D C terminal 732 802 IPR024632 -
Pste2g01751 813 Gene3D C2 domain 43 161 IPR035892 -
Pste2g01751 813 ProSiteProfiles C2 domain profile. 14 128 IPR000008 -
Pste2g01751 813 SMART pld_4 656 683 IPR001736 GO:0003824
Pste2g01751 813 SMART pld_4 326 367 IPR001736 GO:0003824
Pste2g01751 813 SMART C2_3c 33 127 IPR000008 -
Pste2g01751 813 FunFam Phospholipase D 470 702 - -
Pste2g01751 813 SUPERFAMILY Phospholipase D/nuclease 462 730 - -
Pste2g01751 813 PANTHER PHOSPHOLIPASE D 48 802 IPR015679 -
Pste2g01751 813 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 52 151 IPR035892 -
Pste2g01751 813 SUPERFAMILY Phospholipase D/nuclease 155 439 - -
Pste2g01751 813 Gene3D Endonuclease Chain A 481 697 - -
Pste2g01751 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 656 683 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01751 Pste-Chr2 18005135 18008030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01751 49 813 Phospholipase D Gene Family (Wang group) AT3G15730 65.800 0.0 1055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01751 2 18005135 18008030 Pste6g00521 6 1941369 1945698 ECH
Pste2g01751 2 18005135 18008030 Pste2g01752 2 18020341 18022804 ECH
Pste2g01751 2 18005135 18008030 Pste2g01751 2 18005135 18008030 ECH