Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01732 GTTGAGAATTGAGGAGAGAAAAGTGAAAAGAAAAAAAAAAGAGCAAAGTCTGTGTCTTTCTGTTTGCGTTGATCTCAGATTCAGTCTTCGTGATGGCGGAGGGTGCTGCATATGGATTGCGTCGTCCGCTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGATGGTTGCGACCTGCAGAAATTTGTGAAATTCTTCGCAATTATCGGTTGTTTCATATCACATCAGAACCTCATAACAGGCCACCAAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTTTTGAGATACTTTAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACTGTGAGAGAAGCTCATGAAAAGTTGAAGGTTGGAAGTGTTGATGTGTTGCACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAAAGGCGAAGCTACTGGATGCTTGAACCGGATATGATGCACATAGTATTCGTCCATTACTTGGAAGTTAAGGGTAACAAAAATATTATAGTAAATACTGAAGGTGATGAGGTCTCATCAGATTCCCTAAAGTTAACTTCTCCTTCGTCTAGCCTTCCCACACATCATAGCGGTGTTACTTCACCGAGTACAGGTTCTGTGAGCCCAACAACCAGTTTGATGTCTTTACGTGAAGATGCTGATTCTGGTGATCATGGACAGTCATCGATATCTGGAACAGATTATATCCCAGTTGTTCACGGGGATAAATTTAGAGGAAATGATACTGCTTATATTGATCAGAAAACACATGACATGGCACCATGGGGCACTGTCTTGCAAAGCACTGCCAAATTGCTTGATGATCCTTCTCTTGCATCATTTCCTTCCATCCCATCCAGTTCAATGGGAAATGTTCTTGAACAAGAACGTACCATATTTGGCGACCTTTTAATGAGCAAAAGAGGTCTCACTGAGGAAGCAGCTAGCTCTCAATCTCTCCAATCAAATTGGCAGATTTCTTTTGAGGACAATTCAGGAGACATGCCAATGTTAACCCACACCCAATCATTTGGTCTGCAATTTAGATCTGATTATGGCAGTGATATACTTGGGAATCAAACTCGTAATGCAAACTCTGAAATTCCTCCGGTCCTGTACAGTTTTCATGGTGAATCAAAAGAGCAGCCTATGCAGCCAAACAATTATCCACAAGAGGTTGTGGATGGACAATCTCAATATGCACTAAAATTCAATTCTGCAAATAAAGTTCCTGATGAAGATACTGTCAACTACGGCTTAACTGTGAAGCGCACATTATTGGACAATGATGAGAGCCTGAAGAAGGTTGATAGCTTCTCTCGGTGGATTACCAAGGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCCTCACCTGGTATTTCATGGAGTACAGATGAATGCCAGCACGTGATAGATGATACCTCATTGAGCCCATCTCTCTCTCAGTACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATACTGAATCCGAAATTGAGGTGTTGATTATTGGGTCATTTTTGAAGAGTCAACTTAAAGTGACAACCTGTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGATGATGGAATTTTGTGCTGTCAAGCTCCATGTCATAAGGTTGGACGGGTCCCTTTCTATGTAACATGTTCCAATAGATTAGCTTGTAGTGAAGTGCGGGAATTCGATTTCAGAGAGGGCTTTGCTAGAAATGCAGACTTTGCAGATTTCTATAACAGTTCAACTGAAATGCTGCGACTGAAGCATTTTCTTTCTTTAAAACCAGTGGACCCTTCAAATCATTCTTTTGAGGGTGATATGGAGAAAAGGAACTTAATTTTTAAGCTTATTTCACTGAGAGAGGAAGAGGAATATTCTTTTAAGGATGAACCAACTACTGAATTGGATATATCCCAACACATGGAGTATCTGTTTCACAGGCAGGTTAAAGAGAAGCTGTACTCATGGCTTCTTCACAAAGTAACTGAGAGTGTTAAAGGGCCAAATTTATTAGATGAGGATGGACAAGGCGTGCTACATTTAGCAGCTTTTCTTGGTTATGATTGGGCCATAAATCCAATTATATCTGCTGGAGTTAATATCAACTTCCGAGATGTGAATGGATGGACAGCTCTTCATTGGGCTGCATCCTGTGGCAGAGAGCGAACTGTTGGTGTCCTTGTCTCCATGGGTGCAGATTGTGGAGCATTGACAGATCCATCTCCCACATTTCCATCAGGTAGAGCAGCTGCAGATCTTGCCTCTAGCAATGGGCACAAAGGAATCTCTGGTTTTCTAGCTGAGTCTTCATTAACTCACCACCTTGAAACGCTCACAATGGATGATAAAAAAAGTGACCGACAAGAAAATTCAGGAATGAAAGTGGTGCAGACAGCTTCGGAACGAACTGCAACGCCTGTGCTCTATGGTGATATGCCAGATGCCCTCTGCCTCAAGGACTCTCTTACTGCTGTACGGAATGCAACACAAGCTGCTGATCGTATACATCAAGTATACAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAGTATGAAGGTGGTGAGCTTGGATTGTCAGATCAGCAAGCACTTTCCCTTCTAGCTTCTAGGGCATGCAAATCTGGACAAGGAGACGGTTTAGCCAATGCTGCTGCAACACAGATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATGATTCGCCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGAAAAAAGTATAAACCAATCATCTGGTCTGTGGGAATCCTAGAGAAGGTCATATTACGTTGGAGGCGCAAGGGTAGCGGTTTGCGTGGATTTCGACCAAATGCCCTTAATAAAGCCCCCAGTCAACAAAATGATTCTCTGAAAGAGGATGATTATGATTATCTCAAGGAGGGACGAAAACAAAAGGAAGAAAAGATCCAAAAGGCCCTATCAAGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGTGCTCAATACCGGCGTCTACTAACTGTTGTCGAGGACTTCCGTCAAAGCAAGGCATCTAACAAGGGTTTGATAAATTCTGAAGAAACAGTTGATGTTCAACTACTGCAACTTGTCATTTTAGTTATAGTATCTCCATTTTTCTTAAAAAGCTTT 3203 0.4162 MAEGAAYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRLFHITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNKNIIVNTEGDEVSSDSLKLTSPSSSLPTHHSGVTSPSTGSVSPTTSLMSLREDADSGDHGQSSISGTDYIPVVHGDKFRGNDTAYIDQKTHDMAPWGTVLQSTAKLLDDPSLASFPSIPSSSMGNVLEQERTIFGDLLMSKRGLTEEAASSQSLQSNWQISFEDNSGDMPMLTHTQSFGLQFRSDYGSDILGNQTRNANSEIPPVLYSFHGESKEQPMQPNNYPQEVVDGQSQYALKFNSANKVPDEDTVNYGLTVKRTLLDNDESLKKVDSFSRWITKELGEVADLNMQSSPGISWSTDECQHVIDDTSLSPSLSQYQLFSINDFSPKWAYTESEIEVLIIGSFLKSQLKVTTCNWSCMFGEVEVPAEVLDDGILCCQAPCHKVGRVPFYVTCSNRLACSEVREFDFREGFARNADFADFYNSSTEMLRLKHFLSLKPVDPSNHSFEGDMEKRNLIFKLISLREEEEYSFKDEPTTELDISQHMEYLFHRQVKEKLYSWLLHKVTESVKGPNLLDEDGQGVLHLAAFLGYDWAINPIISAGVNINFRDVNGWTALHWAASCGRERTVGVLVSMGADCGALTDPSPTFPSGRAAADLASSNGHKGISGFLAESSLTHHLETLTMDDKKSDRQENSGMKVVQTASERTATPVLYGDMPDALCLKDSLTAVRNATQAADRIHQVYRMQSFQRKQLTQYEGGELGLSDQQALSLLASRACKSGQGDGLANAAATQIQKKFRGWKKRKEFLMIRQRIVKIQAHVRGHQVRKKYKPIIWSVGILEKVILRWRRKGSGLRGFRPNALNKAPSQQNDSLKEDDYDYLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRLLTVVEDFRQSKASNKGLINSEETVDVQLLQLVILVIVSPFFLKSF 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01732 1037 SUPERFAMILY Ankyrin repeat 649 750 IPR036770 -
Pste2g01732 1037 FunFam Calmodulin-binding transcription activator 2 863 911 - -
Pste2g01732 1037 ProSiteProfiles Ankyrin repeat profile. 689 721 IPR002110 GO:0005515
Pste2g01732 1037 SUPERFAMILY E set domains 461 546 IPR014756 -
Pste2g01732 1037 Gene3D - 864 910 - -
Pste2g01732 1037 Gene3D Immunoglobulins 454 549 IPR013783 -
Pste2g01732 1037 Pfam Ankyrin repeats (3 copies) 661 717 IPR002110 GO:0005515
Pste2g01732 1037 ProSiteProfiles Ankyrin repeat region circular profile. 689 715 - -
Pste2g01732 1037 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Pste2g01732 1037 Gene3D - 632 808 IPR036770 -
Pste2g01732 1037 Pfam IQ calmodulin-binding motif 866 884 IPR000048 GO:0005515
Pste2g01732 1037 Pfam IQ calmodulin-binding motif 889 908 IPR000048 GO:0005515
Pste2g01732 1037 SMART iq_5 886 908 IPR000048 GO:0005515
Pste2g01732 1037 SMART iq_5 863 885 IPR000048 GO:0005515
Pste2g01732 1037 MobiDBLite consensus disorder prediction 149 183 - -
Pste2g01732 1037 FunFam Calmodulin-binding transcription activator 2 454 550 - -
Pste2g01732 1037 ProSiteProfiles IQ motif profile. 887 911 IPR000048 GO:0005515
Pste2g01732 1037 ProSiteProfiles IQ motif profile. 864 893 IPR000048 GO:0005515
Pste2g01732 1037 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Pste2g01732 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 864 914 IPR027417 -
Pste2g01732 1037 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Pste2g01732 1037 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1002 - -
Pste2g01732 1037 SMART CG_1_2 18 136 IPR005559 GO:0003677
Pste2g01732 1037 SMART ANK_2a 656 685 IPR002110 GO:0005515
Pste2g01732 1037 SMART ANK_2a 689 718 IPR002110 GO:0005515
Pste2g01732 1037 Pfam IPT/TIG domain 461 535 IPR002909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01732 Pste-Chr2 17859968 17882177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01732 1 1017 CAMTA Transcription Factor Family AT5G64220 52.146 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pste2g01732 CG-1 5.6e-51 No_clan