Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01717 TTTCTGTGCTTCGGAATTTGTATAAACCTAGCAATCTTCTCTGCTGATAAAGCAGTTGATTGATTTCTCGGTGCTCACGCTTGCTGTTGCTAAGAATAATTATTTCTTCTTCTTCTTCTTCTGAGTACGTGCACTCTGCGCAGTGAATTTGGACTTTGATTGAAGAATGGCACAAAATATTGCTACTCCACCCGTTCCTTTTGATTTTGAACTCTTGGTTGGTGATCCTGAGCACCTTAGAACTGTCACAGCCTCATCCAGCAGCACAGACCCATGGATTGAACCTGAAAGGTTGAAACTCAGACACAGGATTGGTCGGGGGCCCTTTGGTGATGTTTGGTTAGCAACTTATCATCAATCAACTGAAGATTATGATGAGTATCATGAAGTTGCTGCCAAGATGTTGCCCCCAATCAGAGAGGAACATATGAAGACTGCATTAGATAAATTTTATGAACTATATTTCCAGTGCCAAGGAGTGATTAGGGTGTGCTGGCCACTTGGAATTTCTATTTTAAATGGAAGGATATGCATCATTATGAATTTTTACGAGGGTTCAATTGGTGACAAGATGGCTAGCCTTAGAGAGGGAAGGATTTCATTGCCTGATGTTCTGAGGTATGGTATCAATCTGGCTCAAGGTATTCTGGAGCTTCACTCAAAAGGGATCCTAGTTCTCAACCTTAAACCATTTAATGTGCTTCTTGATGATACTGATCAAGCAATACTGGGAGATGTTGGTATTCCGAATCTTCTGTTTGGTTCCTCATTCCTAAACTCAGATATGGCCAACAGGCTTGGTACTCCAAATTACATGGCTCCTGAACAATGGCAACCAGAAGTCAGAGGCCCTATATCCTCTGAAACAGATTCCTGGGGATTTGGGTGCACTATCGTAGAAATGTTGACTGGTAATCAACCTTGGTATGGGTGGCCTGTTGGTGAAATATACCGATCTGTTGTTGAAAAGTATGAAAAACCACTGATTCCTAGTGGCCTTCCTTCTTCAGTTGAAAATATCCTCAGTGGTTGCTTTGAATATGATTTTAGGAATCGTCCTTCCATGGTAGATATTGTCGCGGTGTTTAGAAGCTTACTGAATGGAGTAGCCAATGATGGAGGATGGAGATATCTTGGAATTCCCAAAACTATAGCAAAATCAAATAGCACTGGTTACACACAGTGGTCCCTCTCAAAGGATCATCTCCAGGTAGGTGATTCAGTGCGCTCTAGAAAGCCTTTCAATTCATGCAATCCTCAAAACATGGAGGTCCCAGAAGGAAATGTTGTTGGTTTAGAACGTAATGCAGATCATGGATTTGTTTTAGTGAGAGTCCATGGTGTTCATGACCCTGTAAGAATTCATGCATCGTCTCTTGAACGTGTCACCAATGGTTTGGGAGCTGGGGATTGGGTGCGGGTGAAGGAAGAAGATGAGAAGCACTCACCAGTGGGTATTCTTCATTCTATCGATCGTGATGGTAGAGTGACTGTTGGGTTCATTGGTCTGCAAACTCTTTGGAAAGGAAACTCTTCAGAACTTGAAATGGCAGAATCTTACTGTGTGGGCCAGTTTATTAGGATAAAACCCAATGTTTTGAGTCCCCGGTTTGAATGGCCGCGTAAAAGAGGGAGGGCCTGGGCTACTGGTAAGATTTCTTGGATCCTACCAAATGGATGCCTAGTTGTCAAGTTTCCAGGCATGTTGAACTTTTGGGATGCACCAAGCACTATTTTGGCTGATCCCTCCGAAGTTGATGTGGTTAATTTTAAAAATTGTCCAAGGATGATAGAGAAGTATCAACATGTAGAGGATCACCACTGGGCAGTTAGACCTGTTCTAATTGCATTTGGCTTTCTTACTGCTGTGAAACTAGGGATATCGATGGGAAAGAAATTTGGGAGGAACATGAATGTTAATGCAATGGAGAATGAAAGTCATTATACAGATAGCCAGAATGCTAGCAGCCCTACATGGACATCTTCAGTAGCTAACATCCTTTTCAGAGAAGGTGTTAACTTGCCCACTGGTCGGTAGTTTATCCCTTGTATGTCTATACTGTTGGGTAACTAGCAAGCGAAGATGCTTATCACCTGTTCTGCCATGCTGCTGTCTGGACGAACATTTCACTAGAGAATTGTAATTATACATAAATGCCAACAATGTAAAAAATTGTACATATGTCTTGCAAACAAAACTAGTTAGCTTTGTTGATACTTAGTTTCCACAAAAGGCCAATCGTATTGAAACATTCTGGAAAATTCATA 2268 0.4171 MAQNIATPPVPFDFELLVGDPEHLRTVTASSSSTDPWIEPERLKLRHRIGRGPFGDVWLATYHQSTEDYDEYHEVAAKMLPPIREEHMKTALDKFYELYFQCQGVIRVCWPLGISILNGRICIIMNFYEGSIGDKMASLREGRISLPDVLRYGINLAQGILELHSKGILVLNLKPFNVLLDDTDQAILGDVGIPNLLFGSSFLNSDMANRLGTPNYMAPEQWQPEVRGPISSETDSWGFGCTIVEMLTGNQPWYGWPVGEIYRSVVEKYEKPLIPSGLPSSVENILSGCFEYDFRNRPSMVDIVAVFRSLLNGVANDGGWRYLGIPKTIAKSNSTGYTQWSLSKDHLQVGDSVRSRKPFNSCNPQNMEVPEGNVVGLERNADHGFVLVRVHGVHDPVRIHASSLERVTNGLGAGDWVRVKEEDEKHSPVGILHSIDRDGRVTVGFIGLQTLWKGNSSELEMAESYCVGQFIRIKPNVLSPRFEWPRKRGRAWATGKISWILPNGCLVVKFPGMLNFWDAPSTILADPSEVDVVNFKNCPRMIEKYQHVEDHHWAVRPVLIAFGFLTAVKLGISMGKKFGRNMNVNAMENESHYTDSQNASSPTWTSSVANILFREGVNLPTGR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01717 623 Pfam Mind bomb SH3 repeat domain 347 459 IPR040847 -
Pste2g01717 623 ProSiteProfiles Protein kinase domain profile. 43 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01717 623 Pfam Protein tyrosine and serine/threonine kinase 43 305 IPR001245 GO:0004672|GO:0006468
Pste2g01717 623 Gene3D Phosphorylase Kinase; domain 1 20 128 - -
Pste2g01717 623 PANTHER OS06G0639500 PROTEIN 7 619 - -
Pste2g01717 623 SUPERFAMILY Protein kinase-like (PK-like) 40 305 IPR011009 -
Pste2g01717 623 Gene3D Transferase(Phosphotransferase) domain 1 129 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01717 Pste-Chr2 17774242 17778311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01717 31 314 MAP Kinase Kinase Kinase AT2G17700 25.694 1.82e-19 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pste2g01717 PK_Tyr_Ser-Thr 5.5e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01717 2 17774242 17778311 Pste2g01717 2 17774242 17778311 ECH