Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01709 ATGGAGGAAGACTGCAAGCAGGCAATGTTGAGCTTTCTCTTATGCCGCCATCCAGAACAGCTCCTCTCCATCGCTTCTTCTCCTGATCCCAACCTTCACTACCCTCTTTTCATCCATTTCGCAGAGTTGATAGAGGACTATCCTCGCATTGCTCAATTCCTCTATGCTCAACCCAAGACCTACTTGCAACTATTCGATGCTGCTGTCCTCTCAGCCCATAATATCATATTGGAAGAAATGACGAAAAATAAAGAGAGTGGGCTTGAGAAAAAATTCATTCATGTTCGTATTAACATCAGTGGCTCATCCCTTGAATTCCCTGAAACCTTTCCAAGCATAGGACGTGTTCGCGTCCAGCACTATGGAATTCTTCTCACTCTCAATGGGATAGTAATCAGGTCCGGAGCAATCAAGATGCATGAAGGGGAGAGGGACTACATGTGCCAAAAATGCAAAAACAGCTTCCCAGTTTATCCAGAGGTGGAAGCTCGAAACTCCATATCATTACCTTCAATTTGTCCTATTCAGCAGTCAAAACCCTGTGGAGGCACAAAATTCCAGTATATAGAGAATACAATAGTATGTCATGATTATCAGGAGATAAAAATTCAAGAAAGTACACAGGTGCTGGGTGTTGGGGCAATTCCTCGCTCAATTCTTGTCATCTTAAAGGATGACCTTGTCGATGTTGTCAAAGCTGGAGATGATGTGATTGTCACTGGTCTCTTAACCGCAAAATGGTCTCCAGAGTTGAGGGATGTGCGCTGTGACCTTGATCCTGTATTAATTGCCAACAATATAAGGAGAATCAATGAACTGAAGTCAGAAATTGATATTTCAGATGATATTGTTAAGAAATTTAAGCAGTTTTGGGTCCACTTCAAAGATTCACCTCTAAAAGGTGGGAGGAATGCTATTCTAAGAGGAATTTGCCCACAAGTGTTTGGCCTTTTCACTGTCAAGCTGGCTGTTGCATTAACACTTATAGGAGGTGTGCAACATGTTGATGCTTCTGGAACTAGAATAAGAGGGGAGGCCCACTTACTCTTGGTTGGCGATCCTGGCACTGGAAAATCTCAGTTTCTTAAATTTTCTGCAAAACTGAGCAACCGATCTGTTATTACCACTGGGTTGGGAAGCACAAGTGCAGGATTGACTGTTACTGCAGTGAAGGATGGAGGGGAATGGATGTTAGAAGCCGGGGCTCTTGTTTTGGCAGATGGAGGAGTGTGTTGCATAGATGAATTTGATAGGTTGTATACTTTTGCCATACCCTTAAGTTGGTTGAGGAAGTTTCACCAGATGTTTTCGTTCACATTTAATGGAAATTCTGGCAGGACTGTATATTTTTCTTTAGCATCCTGGTACTATGTAACTAAACGTTATTTTGGCAGTATGAGGGAACATGATAGAGCAACAATACATGAAGCCATGGAGCAGCAGACAATAAGTGTTGCCAAGGCTGGTCTTGTAACTACACTGAGCACTAGAACAACTGTATTTGGTGCTACAAATCCCAAGGGACAGTATGATCCTGATCAACCTCTGTCTGTCAATACAACACTCTCTGGTCCTTTATTAAGCAGGTTTGATATCGTCCTTGTTCTCTTGGATACAAAAAATCCTGATTGGGATGCAGTAGTTTCATCCCATATTCTTTTTGAGGCAGAACTGGATGAAACTACCAATAATGAAGATCTGGTAAATAGCTGGCCACTTCCTACACTCAAGAGGTACATAAACTATGTGAAAGAACATTTCAAACCCGTCCTAACAAGGGAGGCTGAAAGAGTTATATCCAGCTATTATCAACTTCAAAGGAAATCTGCAACTTATAATGCAGCTAGAACAACTGTCCGCATGTTGGAAAGTTTGATACGCCTAGCTCAAGCCCATGCGAGGCTGATGTTCAGAAATGAGGTGACTCAACTAGATGCCATCACGGCTATTTTATGCATAGAATCTTCCATGACTACCTCAGCTATTGTGGATTGCATTGGGAATGCTCTACATTCCAATTTTACTGACAATCCTGATGAGGAATCTTTATTTTGCCTCAGCAAGGACTTCCTTTCTACACAGCAAAACAGATACGAAGCAAGAAAGATTGATCCTAGAAAAGTTGGAATCAATAGATGA 2139 0.4184 MEEDCKQAMLSFLLCRHPEQLLSIASSPDPNLHYPLFIHFAELIEDYPRIAQFLYAQPKTYLQLFDAAVLSAHNIILEEMTKNKESGLEKKFIHVRINISGSSLEFPETFPSIGRVRVQHYGILLTLNGIVIRSGAIKMHEGERDYMCQKCKNSFPVYPEVEARNSISLPSICPIQQSKPCGGTKFQYIENTIVCHDYQEIKIQESTQVLGVGAIPRSILVILKDDLVDVVKAGDDVIVTGLLTAKWSPELRDVRCDLDPVLIANNIRRINELKSEIDISDDIVKKFKQFWVHFKDSPLKGGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTRIRGEAHLLLVGDPGTGKSQFLKFSAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGVCCIDEFDRLYTFAIPLSWLRKFHQMFSFTFNGNSGRTVYFSLASWYYVTKRYFGSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGQYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPDWDAVVSSHILFEAELDETTNNEDLVNSWPLPTLKRYINYVKEHFKPVLTREAERVISSYYQLQRKSATYNAARTTVRMLESLIRLAQAHARLMFRNEVTQLDAITAILCIESSMTTSAIVDCIGNALHSNFTDNPDEESLFCLSKDFLSTQQNRYEARKIDPRKVGINR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01709 712 ProSitePatterns MCM family signature. 409 417 IPR018525 GO:0003677|GO:0005524|GO:0006260
Pste2g01709 712 ProSiteProfiles MCM family domain profile. 302 552 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g01709 712 Pfam MCM AAA-lid domain 575 656 IPR041562 -
Pste2g01709 712 SUPERFAMILY Nucleic acid-binding proteins 33 249 IPR012340 -
Pste2g01709 712 Gene3D - 270 421 IPR027417 -
Pste2g01709 712 Gene3D - 463 662 IPR027417 -
Pste2g01709 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 312 666 IPR027417 -
Pste2g01709 712 Gene3D - 140 196 - -
Pste2g01709 712 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 36 418 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pste2g01709 712 Pfam MCM OB domain 115 244 IPR033762 -
Pste2g01709 712 Gene3D - 116 244 IPR012340 -
Pste2g01709 712 Pfam MCM P-loop domain 463 553 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g01709 712 Pfam MCM P-loop domain 305 419 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g01709 712 SMART AAA_5 344 540 IPR003593 GO:0016887
Pste2g01709 712 SMART mcm 109 658 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pste2g01709 712 PRINTS Mini-chromosome maintenance (MCM) protein family signature 343 358 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g01709 712 PRINTS Mini-chromosome maintenance (MCM) protein family signature 526 534 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g01709 712 PRINTS Mini-chromosome maintenance (MCM) protein family signature 476 489 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01709 Pste-Chr2 17734210 17745502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01709 7 684 Core DNA Replication Machinery Family AT2G14050 68.971 0.0 967