Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01686 ACAAAACCGAAGCAGATTCACCATTTGCGATTTGCATTGGCCGTAGGGAATCTCCTTGCGAAGGAAAATGGGATTCATCAGCGGCATGATCATTGGTATAGCCATTGGAATCGCATTGATCGTCGCTTTCGCTCGTCACGAAAGCGTTCGATCCAAGCGTCGCTCCGATTTGGCAAAGACGATAGCACAGTTTGCGAGGATGACAGTGGAGGATTCCAGAAGACTTTTGCCTTCCAAATTCTATCCGTCATGGGTGGTCTTCACTCGGAACCAGAATTAAATTGGCTTAATAGCCAACTCAAGAAGATATGGCCATACGTTAACGAGGCTGCGTCAGAGTTGATAAGGGTCAATGTGGAACCTATTCTTGAACAATATAAGCCGGTTATTTTGTCTTCTCTCACCTTCTCCAAGTTGACCCTTGGCACTGTGGCTCCTCAATTTATAGGAGTTTCAATTGTTGAAGAGAGTAGTGGACGTGATGGGATCACTATGGATCTTGAGATGCAATGGGATGGTAACCCGAATATCGTTCTTGACATTAAAACCCGAATTGGTGTTGTACTTCCTGTGCAGGTAAAAAATATTGGATTCACTGGGGTTTTCAGGTTGATCTTCAAACCACTAGTGGACGAGTTCCCTGCCTTTGGAGCTGTTTGTTTTTCCTTGAAAGAAAAAAAAGATCTGGATTTTACTCTTAAGGTTATTGGTGGTGATTTATCAGCTTTCCCGGGGATATCTGATATTTTAGAGGAAACAATTAGAGATGCCGTTGAAGACTCTATAACTTGGCCAGTACGCAAAGTCATACCAATTCTACCGGGAGATTACAGTAATCTGGAGTTGAAACCGGTTGGAATACTAGAAGTAAAACTAGTGCAAGCAAAGAACTTGATGAATAAAGATATAATTGGGAAATCCGATCCTTATGCTGTAATATTTGTACGCCCCCTTCGTGACAGAACCAAAACCAGTAAAAATAACCAGTTGAATCCAGTATGGAATGAGCACTTTGAGTTCATTATTGAAGATGCATCAACGCAGCACTTGACCGTAAGAATTTTCGATGACGAAGGCATTCAGGCCTCTGAACTTATTGGTTGTGCCCAAGTTTCGCTGAAGGACCTTGAACCTGGTAAAGTCAAGGATATGTGGCTTAAGCTGGTTAAAGATTTGGAGGTCCATAGAGATAACAAATACAGGGGTGAGTTGGAGCTCTTATACTGCCCAGATGGAGTGGAAAGCACCATTAAGAACCCTTTTGACCCTGATTTCTCATTAACCTCGTTCGAGAAGACCCTCAAGAGTGGAACTGGTGACGCAGAGGCTGATGATCCTATAGGGTCACGTAAGAGAAACAACGTGATTGTAAGAGGGGTTCTATCTGTGACAGTGATTTCAGCTGAAGACTTACCACAAGTGGATTTAATGGGCAAGGCTGATCCATTTGTTGTCCTTATGTTGAGAAAAACAGAGAAAAAACTCAAGACCAGAGTTGTAAATGAATCACTAAACCCAGTTTGGAATCAGACATTTGATTTTGTTGTCGAGGACGGCTTACACGAAATGTTAACTCTTGAAGTCTATGATCATGATACGTTTGGCAAGGAAAAAATTGGAAGAGTGATCTTAACACTGACTAAGGTCATCTTAGAAGGGGAATACAGTGAAATTTATCCTCTAGATGGAGCAAAATCTGGAAATATTTCTTTGCATTTGAAGTGGACTCCACAGCACAAGTTCCGGGATACG 1752 0.4212 TKPKQIHHLRFALAVGNLLAKENGIHQRHDHWYSHWNRIDRRFRSSRKRSIQASLRFGKDDSTVCEDDSGGFQKTFAFQILSVMGGLHSEPELNWLNSQLKKIWPYVNEAASELIRVNVEPILEQYKPVILSSLTFSKLTLGTVAPQFIGVSIVEESSGRDGITMDLEMQWDGNPNIVLDIKTRIGVVLPVQVKNIGFTGVFRLIFKPLVDEFPAFGAVCFSLKEKKDLDFTLKVIGGDLSAFPGISDILEETIRDAVEDSITWPVRKVIPILPGDYSNLELKPVGILEVKLVQAKNLMNKDIIGKSDPYAVIFVRPLRDRTKTSKNNQLNPVWNEHFEFIIEDASTQHLTVRIFDDEGIQASELIGCAQVSLKDLEPGKVKDMWLKLVKDLEVHRDNKYRGELELLYCPDGVESTIKNPFDPDFSLTSFEKTLKSGTGDAEADDPIGSRKRNNVIVRGVLSVTVISAEDLPQVDLMGKADPFVVLMLRKTEKKLKTRVVNESLNPVWNQTFDFVVEDGLHEMLTLEVYDHDTFGKEKIGRVILTLTKVILEGEYSEIYPLDGAKSGNISLHLKWTPQHKFRDT 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01686 584 Gene3D C2 domain 284 410 IPR035892 -
Pste2g01686 584 ProSiteProfiles C2 domain profile. 267 386 IPR000008 -
Pste2g01686 584 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 91 575 IPR045050 GO:0008289
Pste2g01686 584 FunFam Extended synaptotagmin-2 441 579 - -
Pste2g01686 584 Pfam C2 domain 286 388 IPR000008 -
Pste2g01686 584 Pfam C2 domain 459 561 IPR000008 -
Pste2g01686 584 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 455 578 IPR035892 -
Pste2g01686 584 Gene3D C2 domain 456 583 IPR035892 -
Pste2g01686 584 SMART C2_3c 287 385 IPR000008 -
Pste2g01686 584 SMART C2_3c 460 558 IPR000008 -
Pste2g01686 584 CDD C2 461 561 - -
Pste2g01686 584 PRINTS C2 domain signature 524 532 IPR000008 -
Pste2g01686 584 PRINTS C2 domain signature 502 515 IPR000008 -
Pste2g01686 584 PRINTS C2 domain signature 476 488 IPR000008 -
Pste2g01686 584 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 89 273 IPR031468 GO:0008289
Pste2g01686 584 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 94 272 IPR039010 -
Pste2g01686 584 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 284 409 IPR035892 -
Pste2g01686 584 CDD SMP_SYT 94 272 - -
Pste2g01686 584 ProSiteProfiles C2 domain profile. 442 559 IPR000008 -
Pste2g01686 584 CDD C2 288 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01686 Pste-Chr2 17589869 17596411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01686 287 575 Lipid Metabolism Gene Families AT4G00700 23.718 3.60e-11 64.3