Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01660 GAAGGGAGAAGGGAGAAGCTGAAAATAAAAAAGGAGAAAAAGCGGGGCTCACTGGAAAAAGCAGTTTCCGGAATTAGTAAGTAATGACTAATGACTAATGAATAATGACGGAAAACCAGTGTGAGAAGAAGTGAAAACCGCCCCATCTGAGTGTGTCTCTGGTCGGGTTTCATTGTAACCATTAATTAATATATAACGTTGGTAGTAACTCACAACACAACATCATCTGTTCCCTCCCTTTTTCCTTGAGAGCATGAAGCAATAGGTAGCTACTTTTCAAGTTTCCACACATTCTTCTTCCTTTATATGGCGTACCACAACCCCCAAGACCTTCCACTTAACCATTTCGCCGACCAACCTCTCCCTCACGCCTCCTTGCTCTCCGACCCTACCTCCAAACCTCCCTCCGATCCTCACCAACCAGCGCCAAATTGGCTCAACAACGCCCTTCTCCGCACGCACTACGCAACAACAACAACAACAACTCCAACTCCAACTCCAACTCCAACTCCAACACTAACGCTGCCAACTTCCTCAACCTCCACACTTCCGCTTCCGACTCCTCCGCCGCCCAATGGCTCGCCCGCCCCACCCTCCACCGCAACCACAGCGAGGTCATCGACGACGTCGCCGCCCCCGCTGCTGAATCCGCCGATTTGAAGGCCGAGGCCCCGCCGCTCGAGCCCGGACCCGACGGACTCCTCAACTGGCAGAATGCCAGGCTCAAGGCCCAGATTCTCGGCCACCCTCTCTACGAACAGCTTCTCTCTGCACACGTCGCATGCTTGCGGATCGCCACTCCCGTCGACCAGTTGCCCAGGATCGACGCTCAGCTCGCACAGTCCCAGAATGTGGTCGCCAAATACTCTGCCTTCGCGCTCGCTGACGATAAGGAACTCGATCAATTCTTGTCACACTACGTTCTGTTGCTCTGTTCTTTCAAAGAACAGCTCCAACAGCATGTCCGGGTCCATGCAATGGAGGCAGTAATGGCTTGTTGGGAGATCGAGCAATCCTTACAAAGTCTTACAGGAGTTTCACCCGGGGAAGGTACAGGAGCAACAATGTCTGATGACGAAGACGAGCAGGTAGATAGTGATGCCAATCTGTTTGATGGTGGCTTGGATGGTCCTGATAGCATGGGATTCGGTCCTCTTATTCCCACAGAGAATGAGAGGTCCCTCATGGAACGTGTAAGACATGAATTAAAGCACGAATTGAAACAGGGTTATAAAGAGAAAATTGTGGACATAAGAGAGGAAATTTTACGCAAGAGACGAGCCGGGAAACTTCCTGGTGACACGACCTCTGTCCTTAAAGCTTGGTGGCAATCACATTCCAAGTGGCCTTACCCTACAGAGGAGGATAAGGCACGGTTGGTGCAGGAAACGGGTTTGCAGTTAAAGCAGATCAATAATTGGTTTATCAATCAAAGGAAGAGGAACTGGCATAGCAATCCGTCAACTTCAACTGTCTTGAAGAGCAAGCGCAAAAGGCAAATGTCATGGGAACTACGAGGGTTTGTGTAA 1529 0.5043 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDEDEQVDSDANLFDGGLDGPDSMGFGPLIPTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKRQMSWELRGFV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01660 183 ProSiteProfiles 'Homeobox' domain profile. 96 159 IPR001356 GO:0003677
Pste2g01660 183 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 35 161 - -
Pste2g01660 183 SMART HOX_1 98 163 IPR001356 GO:0003677
Pste2g01660 183 CDD homeodomain 99 160 IPR001356 GO:0003677
Pste2g01660 183 ProSiteProfiles ELK domain profile. 76 96 IPR005539 GO:0003677
Pste2g01660 183 FunFam homeobox protein knotted-1-like 3 isoform X1 97 158 - -
Pste2g01660 183 SMART ELK_2 76 97 IPR005539 GO:0003677
Pste2g01660 183 Gene3D - 97 158 - -
Pste2g01660 183 Pfam ELK domain 76 97 IPR005539 GO:0003677
Pste2g01660 183 SUPERFAMILY Homeodomain-like 98 162 IPR009057 -
Pste2g01660 183 Pfam Homeobox KN domain 116 155 IPR008422 GO:0003677|GO:0006355
Pste2g01660 183 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01660 Pste-Chr2 17329268 17333682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01660 1 173 Homeobox Transcription Factor Family AT5G25220 93.064 7.86e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pste2g01660 Homeobox_KN 5.8e-18 CL0123