Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01659 TCACTACCTTCTCTCTTTCACTTTAAATACCAACACCATCCACCTTCATCCTCTATTTGCTTCAATTGGAGATACCAATATGAACCTTCCACTTCCACCCGGGTTCCGATTTTATCCCACAGATGAAGAGCTTGTTGTGCATTTCCTTCACAGAAAGGCGTCACTTTTACCTTGCCACCCCGATGTCATCCCTGATCTTGAGGTGTACCCATATGATCCATGGGAACTTGATGGTAGAGCTTTGGCAGAGGGAAATCAATGGTACTACTTCAGCAGAAAGACACAAAATAGGGTGACTGGAAATGGGTATTGGAAAGCAACGGGTACAGAAGAACCAGTGGTTTCAAACACTAGCAACAAGAGAGTTGGCATGAAGAAATATTATGCGTTCCATGTAGGACAAACCCCTGCTGCTATCAAAACCAATTGGATAATGCAAGAATATCGTCTATCAGATTCTGCTTCCTCTACCAGATCATCCAAAAGAAAGTCACAATCAAAAATAGAATACAATAAATGGGTGATATGTCGTGTTTATGAGCGCAGTGGAGACGATGATAATGGAACAGAGCTGTCTTGTTTGGATGAAGTTTTCTTGTCACTGGATGATGATCTTGATGAAATAAGCTTACCAAATTAGCTGAAATGCAAGTCATCTAGCTAGCTAGACGCAGTGGATAGTTAATTAAAATAATCGTTGCTTGTTGTAGTTAGATCCAATGTAGGTGGCATTGTAATCACTGAAATATGGCTCTTACCAGATTTTCATAGCAGCCCTTCAAAGTGGGGCACTTTGTAACAAATTCATGCCCAAACAATATGTAGTATGACG 832 0.4075 MNLPLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLEVYPYDPWELDGRALAEGNQWYYFSRKTQNRVTGNGYWKATGTEEPVVSNTSNKRVGMKKYYAFHVGQTPAAIKTNWIMQEYRLSDSASSTRSSKRKSQSKIEYNKWVICRVYERSGDDDNGTELSCLDEVFLSLDDDLDEISLPN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01659 186 PANTHER NAC TRANSCRIPTION FACTOR 56 5 161 - -
Pste2g01659 186 FunFam NAC domain-containing protein 104 14 158 - -
Pste2g01659 186 Pfam No apical meristem (NAM) protein 6 124 IPR003441 GO:0003677|GO:0006355
Pste2g01659 186 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Pste2g01659 186 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Pste2g01659 186 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01659 Pste-Chr2 17325412 17326476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01659 5 173 NAC Transcription Factor Family AT1G69490 41.011 1.73e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste2g01659 NAM 3.8e-31 No_clan