Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01647 GAGAAGCAAAGGGTCAGGTCCTTGGACATAATAAGGTGGACCAAAACCAAAGATGATGGAATCCGGGGCTCACTTCTGCAACTCTTGTGGTGAACAAGTTGGACTTGATGCTAATGGGGAGGTGTTTGTGGCGTGTCATGAGTGCTATTTTCCAATTTGTAAGGCTTGTTTTGAATATGAAGTCAATGAGGGGCGTAAGTCCTGCTTGAGATGTGCCACTCCCTATGCTGATAATGATGATGCCAAGGTTTATGGAAATCAATCCACAATGGCTGCCCAAATCAATGTTTCCCAGGATGTTGGGCTCCATGCTAGGCATGTCAGTACTGTGTCCACAGTGGATAGTGAATTAAATGATGAATATGGGAATCCAATTTGGAAAAATAGAGTGGAGAGCTGGAAGGAAAAGGATAAAAAGAGCAAGAAGAAGAAGTCTGCACCTAAGGTTGAAAATGAGGCGTCAATTCCACAAGAACAACAGATGGAAGAAATACAGTCCTCAGAGGCTGCTGCTGCTGAACCACTTTCAATTATTATTCCAGTCTCAAAAACAAGACTCACACCATACAGAGTTGTGATAGTCGTGCGACTGATAATCTTGGGTCTTTTCTTCCATTATAGAGTTACAAATCCTGTTGACAGTGCCTTTGGTCTGTGGTTGACATCTATCATATGTGAGATTTGGTTTGCATTTTCCTGGGTATTGGATCAGTTCCCTAAATGGTATCCCATCAACAGGGAAACTTTTATTGACAGGCTTTCTGCAAGGTATGAAAGACCTGGCGAACTCTCTCAGCTTGCTGCTGTGGATTTCTTCGTCAGTACAGTCGATCCTCTGAAAGAACCGCCATTGATCACGGCTAATACAGTGCTTTCTATTCTTGCTGTGGACTACCCAGTGGACAAAGTATCCTGTTATGTGTCAGATGATGGTGCTGCAATGTTGACATTTGAGTCTCTTGTAGAGACAGCTGACTTTGCAAGGAAGTGGGTTCCGTTTTGCAAAAAGTTTTCGATAGAACCACGAGCACCTGAGTTCTACTTCTCTCAAAAGATTGACTATCTGAAGGACAAAGTACAACCTTCTTTTGTGAAGGAACGTAGAGCCATGAAAAGAGATTATGAAGAGTTTAAAGTGCGAATTAATGCTTTGGTAGCAAAGGCTCAGAAAACGCCAGATGAAGGATGGACTATGCAAGATGGAACCTCATGGCCAGGAAATAACTCACGTGATCACCCTGGAATGATTCAGGTTTTCCTTGGACACAGTGGTGCCCATGACATAGAAGGAAATGAACTTCCCAGGTTAGTGTATGTTTCCAGAGAGAAAAGGCCGGGTTACCAACACCATAAAAAGGCTGGTGCTGAAAATGCTCTGGTGAGAGTGTCTGCAGTTCTCACAAATGCTCCCTTCATTCTCAATCTTGATTGTGATCATTATGTGAACAATAGCAAGGCAGTTCGGGAAGCAATGTGTTTTCTGATGGATCCAGTAGTTGGTAGAGATTTGTGTTATGTGCAGTTTCCTCAGAGATTTGATGGTATTGATCGTAGTGATCGATATGCCAATCGTAACACAGTTTTCTTTGATGTTAACATGAAAGGACTTGATGGCATTCAAGGACCCATGTATGTGGGAACTGGATGTGTTTTCAATAGACAAGCGCTCTATGGCTACAGCCCACCTTCTATGCCCAAATTACCTAAATCGTCGTCCTGCTGCTGCTGCCCCTCAAAGAAGCAAACCAAAGATGTTTCAGAGCTTTATAGAGATGCTAAGAGGGAAGAACTTGATGCTGCCATTTTTAATCTCAGGGAGATAGACAACTATGATGAATATGAGAGGTCAATGCTGATTTCACAAATGAGCTTTGAGAAAACATTCGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAATGGAGGGCTTCCTGAATCTGCTGATCCCTCAATGCTGATCAAAGAGGCCATTCATGTTATTAGCTGTGGATATGAAGAGAAGACTGCATGGGGAAAAGAGATTGGTTGGATCTATGGTTCAGTGACTGAGGATATCTTAACAGGATTCAAGATGCAATGCCGGGGATGGAGGTCAGTTTACTGCATGCCCCTAAGGCCTGCATTCAAGGGATCAGCACCAATCAATCTTTCTGATCGTTTGCACCAAGTTCTTCGATGGGCACTTGGATCAGTTGAAATTTTCTTTAGCAGACATTGCCCCCTCTGGTACGGTTTTGCAGGAGGCCGCCTCAAATGGCTGCAGAGACTGGCTTACATAAACACCATTGTCTACCCATTTACATCCCTTCCTCTCATTGCTTATTGCACTTTGCCTGCAATTTGCCTTCTCACAGGAAAATTTATCATTCCAACGCTTTCGAACCTTGCAAGTGCCCTCTTTCTTGGACTTTTCCTCTCCATTATAATCACCAGTGTGCTTGAGTTGCGGTGGAGTGGTGTGACCATTGAAGCATTGTGGCGTAATGAGCAGTTCTGGGTTATTGGAGGAGTTTCAGCCCATCTGTTTGCTGTGTTCCAGGGATTCCTGAAGATGTTGGCAGGTGTTGACACCAACTTCACTGTCACAGCCAAAGCAGCTGATGACACTGAGTTTGGTGAACTATATATCATCAAGTGGACCACACTCTTAATTCCTCCAACAACCCTTATCATTGTTAACATGGTTGGTGTTGTGGCTGGATTTTCTGATGCTCTTAATGGAGGATATGAGTCTTGGGGACCACTTTTTGGAAAGGTTTTCTTTGCCTTCTGGGTCATATTCCATCTCTACCCATTCCTCAAGGGTCTCATGGGTCGCCAAAACCGTACTCCAACTATTGTTATTCTGTGGTCAGTGTTGTTGGCCTCTGTCTTCTCTCTGGTGTGGGTCAAGATTAATCCTTTCATCAGCAGAGCAGACAGTTCAAGCATCTCGCAGACCTGCATTTCCATAGATTGCTAAGTCACTGCCTACATAAAAGTTTTGACCATATGCTTAAAATATGGATGATTCTTGATGATGCTTTGAGCCACATTAGTTCTTTGTTGAAATGTGTAAGCATTTAAAAGTAAGGTTGCAAACATCGTTGCTACTTCTTTTTCAGGCATTTAATGAATTTATTGTGTAAAGATCAAGCGTTGACTGATTGTATCAAAGTAAAATAGAG 3173 0.4292 MMESGAHFCNSCGEQVGLDANGEVFVACHECYFPICKACFEYEVNEGRKSCLRCATPYADNDDAKVYGNQSTMAAQINVSQDVGLHARHVSTVSTVDSELNDEYGNPIWKNRVESWKEKDKKSKKKKSAPKVENEASIPQEQQMEEIQSSEAAAAEPLSIIIPVSKTRLTPYRVVIVVRLIILGLFFHYRVTNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWYPINRETFIDRLSARYERPGELSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEFKVRINALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGHSGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVVGRDLCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPMYVGTGCVFNRQALYGYSPPSMPKLPKSSSCCCCPSKKQTKDVSELYRDAKREELDAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSTVFIESTLMENGGLPESADPSMLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSVYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASALFLGLFLSIIITSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDTEFGELYIIKWTTLLIPPTTLIIVNMVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFISRADSSSISQTCISIDC 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01647 971 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 399 543 IPR029044 -
Pste2g01647 971 Pfam Cellulose synthase 252 962 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste2g01647 971 FunFam Cellulose synthase 369 543 - -
Pste2g01647 971 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 156 936 - -
Pste2g01647 971 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 78 IPR013083 -
Pste2g01647 971 MobiDBLite consensus disorder prediction 120 146 - -
Pste2g01647 971 Pfam Zinc-binding RING-finger 5 69 IPR027934 -
Pste2g01647 971 CDD mRING-HC-C4C4_CesA 7 57 - -
Pste2g01647 971 SUPERFAMILY Nucleotide-diphospho-sugar transferases 266 768 IPR029044 -
Pste2g01647 971 SUPERFAMILY RING/U-box 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01647 Pste-Chr2 17233959 17240164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01647 1 971 Glycosyltransferase AT4G18780 82.030 0.0 1675