Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01638 TTAACTTTGAAAAACTTCACAATTCTTAACACGACACAAAACACACTCTCCCTGTCGGCTTCTTCCATCGCATATCTCTATCCTCATGTATTCTTACAACTAACAATGAAAATGAAGCTTCTCCTTTTGCTCCTTCTTATTTTTCTTCTTCACCACGTCGCTGCAGACCCTCCTGCTTTCTCTCCTGCAGGGAAAGAGCAGCATCACCTGCACAAGAAAGTAGTAATAGCTATCGTCCTAGCCACCACTGCACTTATTTTCAGTTTCTTATGCTTCTGGATTTATCACACCAAGTATCCAACAAAATCCAAAACCAAAAATATTCAAACTCCAGATGCGGAGAAGGGGATCACATTAGCACCGTGTTTGAGTAAATTCAGCTCTATCAAGGTTGTTGGCATGAAGGAGTCGGTCCCAATAATTGATTATAAGCAGATAGAAAAAACGACCAACAATTTTCAAGAAAGTAACATCTTGGGTGAGGGCGGTTTTGGACGTGTTTACAAGGCTCGCTTGGATCATAACTTGGATGTTGCAGTAAAAAAACTACACTGTGAGACTCAAAATGCTCAGAGAGAATTCGAGAACGAGGTGAATTTGTTAAGTAAAATTCAGCATCCGAATATAATTTCTTTACTGGGATGTAGCATTGATGGCGATATTACAAGGTTTATTGTCTATGAGCTCATGCAAAATGGATCATTGGAAGCTCAGTTACATGGACCTTCTCATGGCTCGGAATTGACATGGCAGATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAATATCTGCACGAGCACTGTCACCCTGCAGTGATCCATAGAGATATGAAATCTTCTAATATCCTCTTGGATGCAAATTTCAATGCCAAGCTGTCAGATTTTGGTCTTGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAACTATCGGGTACCATGGGATACGTAGCACCAGAGTATCTTCTAGATGGTAAATTAAGTGACAAAAGTGATGTGTATGCTTTTGGGGTTGTGTTATTGGAGCTCATATTAGGAAGGAAGCCAGTGGAAAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACCGACAGATCCAGGCTTCCGAACATAGTGGATCCAGTGATTAAGAATACAATGGATCCCAAACACTTGTACCAGGTTGCTGCTGTAGCTGTGCTGTGCGTGCAACCAGAGCCTAGTTACCGTCCACTGATCACAGATGTTCTTCATTCACTCATCCCTCTTGTTCCCATTGAGCTTGGAGGAACACTAAGAGTTTCTCAAGTGAGGCAGCATCTCACTCTTGCTGATCCATCTGTGAATTCCCGTCATTGAGATTACCTATCAATTTGATACACGCTAAACAGTGACAATTAATTAAGGACATGATTTGTGATCACGAAACAGATTGGTTTTTACCACACACTCAAAACTACGGATAGATCCACGTCAAACTATAAGGACATTCATTCGGGAAGGATGTTTGTGTTTAATAGGGAAGAAGAGAAATAGATTGTTAATAACAAATGTAAAGAAGAAATTAGTACACTTTGGTGAGGGAAAATTGTGTATAGGGAGTATTGAATTTGTATGAACTTGGATCTGGTTGTGTTCCATTTCATACTTTGGGTGTGTGAAATTACATAAAGAAAAAATATACAAAATGTGTTCAGAGAAAAAAGTATGGTTCGG 1728 0.4039 MKMKLLLLLLLIFLLHHVAADPPAFSPAGKEQHHLHKKVVIAIVLATTALIFSFLCFWIYHTKYPTKSKTKNIQTPDAEKGITLAPCLSKFSSIKVVGMKESVPIIDYKQIEKTTNNFQESNILGEGGFGRVYKARLDHNLDVAVKKLHCETQNAQREFENEVNLLSKIQHPNIISLLGCSIDGDITRFIVYELMQNGSLEAQLHGPSHGSELTWQMRMKIALDTARGLEYLHEHCHPAVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTMGYVAPEYLLDGKLSDKSDVYAFGVVLLELILGRKPVEKLAPAQCQSIVTWAMPQLTDRSRLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRVSQVRQHLTLADPSVNSRH 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01638 421 CDD STKc_IRAK 124 392 - -
Pste2g01638 421 Pfam Protein tyrosine and serine/threonine kinase 121 354 IPR001245 GO:0004672|GO:0006468
Pste2g01638 421 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Pste2g01638 421 PANTHER OS01G0750732 PROTEIN 30 393 - -
Pste2g01638 421 SUPERFAMILY Protein kinase-like (PK-like) 97 389 IPR011009 -
Pste2g01638 421 Gene3D Transferase(Phosphotransferase) domain 1 195 394 - -
Pste2g01638 421 FunFam Protein kinase superfamily protein 85 194 - -
Pste2g01638 421 SMART serkin_6 118 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01638 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Pste2g01638 421 ProSiteProfiles Protein kinase domain profile. 118 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01638 421 Gene3D Phosphorylase Kinase; domain 1 82 194 - -
Pste2g01638 421 FunFam probable receptor-like protein kinase At1g80640 195 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01638 Pste-Chr2 17143414 17147038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01638 32 393 Receptor kinase-like Gene Family AT3G58690 42.547 8.72e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pste2g01638 PK_Tyr_Ser-Thr 1.3e-48 CL0016