Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01634 CACAACTCTATCACTCAACATTTTCACCAACACTTTCTGAAAAGAATTCGTTTCTTTTCCCTAAGATGGCCAGATCACAACAGAGATACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGACACCCCATATTGAAAACTAGGATATGGCTAGGAACTTTTGAAACTGCTGAAGATGCAGCCAGAGCTTATGACGAAGCAGCAAGGCTAATGTGTGGCCCAAGGGCAAGAACAAACTTCCCTTACAATCCTAATGCGTCTCAGTCATCATCTTCGAAGCTTCTCTCAGCAACTTTAACTGCAAAACTGCATAGGTGCTGCATGGCTTCATTGCAATTGACAAGGCCATCACTGCCAGAACCTCAGAGAGTGGCTTCACCAAATGTCATCACCTCCGGAAGCAACTTCCCCATGAAGAATAACCAAACGGAGACAATGTTGCCACGGAAAAGACAAGAGGAGGAGCAAGAAGCAGAGGAGAATTGGGTTTTCAAGAAGGTTAAGGTGGAGAATGCTCAGCAGTTCAAGCCTCTTGAAGAGGACCACATCGAGCAAATGATAGAGGAGTTGCTGCATTACGGGTCCATTGAGCTATGTTCCATCATTCCACCACAGGCTCTATAATTTTAGAATAACCAAGCATTGAGGATTGAGCAAGCATTTTTATCGTTAGTTCACATTCTTATTCTGCTAATTTTAACTAATTCTCATCCATAATTTCAGTCTCTATTATTATTATTATTATTATTATTATTAATAAGTGCTTTAGGTGCTAGAATAGACTAGA 801 0.4195 MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNASQSSSSKLLSATLTAKLHRCCMASLQLTRPSLPEPQRVASPNVITSGSNFPMKNNQTETMLPRKRQEEEQEAEENWVFKKVKVENAQQFKPLEEDHIEQMIEELLHYGSIELCSIIPPQAL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01634 190 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Pste2g01634 190 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Pste2g01634 190 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Pste2g01634 190 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Pste2g01634 190 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Pste2g01634 190 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Pste2g01634 190 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Pste2g01634 190 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Pste2g01634 190 MobiDBLite consensus disorder prediction 101 124 - -
Pste2g01634 190 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Pste2g01634 190 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01634 Pste-Chr2 17117995 17118992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01634 1 190 AP2-EREBP Transcription Factor Family AT5G25190 63.452 2.88e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g01634 AP2 4.5e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01634 2 17117995 17118992 Pste2g01634 2 17117995 17118992 ECH
Pste8g00112 8 645583 646497 Pste2g01634 2 17117995 17118992 PCT