Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01612 GGAGATCGGCCTCAAAAGGGATCTGATTATGGAGATTACTCATCTTCAAAGAAGAGGACAGATGAGGATGAAGACGGAGATGAGAGAGATGACGCCTCCACGTTGAAGAAGCCACGAGTTGTTTGGTCTGTTGAGCTTCATCAACAGTTCATGGCTGCTGTGAATCAACTTGGAATTGATAAGGCTGTTCCTAAAAAGATTTTGGAATTGATAAACGTTCCTGGGCTCACTAGAGAAAATACCATTGGTAATCTTAGAAGGCTGAGTGGAGTTTCACAACAGCAAGGTAACTTGAACAACTTCATCAGCTCACAAGAAGCATCATTTGGGGCAACCTCAATCAATGGAATTGATCTTCAAACTTTTCAAGAGTTGGTAGGACAGCTGCTAAAGCAAGTGTGCCTACAACATTTAGGCAACAGCAAACCAATAAACTTGCTTCATGGAATTCCTACCTACATGGAGCCAAAACAACTTGCCAATTTGCACCAATCTAGCCGATCTCTTGGAAACTTGCATATTCAGATTTTCTGGTTTGGGAATTTGAATTATCGTGTCAATATGTTGGATACCGAGGTTAGAAAATTGGTGAGCTTCAAGAAGTGGGATGAGCTCATGAATAATGATCAGAGCCTGATGATAAGTGACACCCTTAGCTCTGCTGCAAAGCTTCAGCTTGCAGTGATAGTGGCTGATGGACATCTCTCAGCACTTCCTAAGGATGTCCCTTATTTGTATTTTGAGCCAAAGATGAACGGATACTGCTGGAAGAGTGAAGGAGGCAACGGAAATTCTCTCAGAAATACTTCAAGCTCCAGACGCATTGAACCTGGAGAAGCAAATGTTCTTGGCTTGCAGACACCGGTAGAC 870 0.4287 GDRPQKGSDYGDYSSSKKRTDEDEDGDERDDASTLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILELINVPGLTRENTIGNLRRLSGVSQQQGNLNNFISSQEASFGATSINGIDLQTFQELVGQLLKQVCLQHLGNSKPINLLHGIPTYMEPKQLANLHQSSRSLGNLHIQIFWFGNLNYRVNMLDTEVRKLVSFKKWDELMNNDQSLMISDTLSSAAKLQLAVIVADGHLSALPKDVPYLYFEPKMNGYCWKSEGGNGNSLRNTSSSRRIEPGEANVLGLQTPVD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01612 290 FunFam Two-component response regulator 33 87 - -
Pste2g01612 290 Gene3D Endonuclease/exonuclease/phosphatase 134 229 IPR036691 -
Pste2g01612 290 SUPERFAMILY Homeodomain-like 34 80 IPR009057 -
Pste2g01612 290 Gene3D - 34 87 - -
Pste2g01612 290 MobiDBLite consensus disorder prediction 1 34 - -
Pste2g01612 290 MobiDBLite consensus disorder prediction 266 290 - -
Pste2g01612 290 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 83 IPR044841 GO:0003700|GO:0006355
Pste2g01612 290 Pfam Sucrose synthase 184 258 IPR000368 GO:0005985|GO:0016157
Pste2g01612 290 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 80 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01612 Pste-Chr2 16990897 16993157 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01612 14 143 Response Regulator Gene Family AT3G16857 61.806 1.05e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste2g01612 Sucrose_synth 3.4e-06 CL0113