Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01606 AAAGCCCAAGGCGAAGCGAACAGAGTAGAGGAGACAGAGAAGAAAGTTGAAAATGCCGAAGTCGAAGAGGAACAGACAAGGTTTGCGATTGTTACGCTTTCGAAGACGAAGAAAAAGGGAAGAGAGCATAAAGAGGTGATTGTGAACGGAATAAAAGAGGCGGCTGAAAAGTACGAATGGGTTTACGTGTTCTCCTTCCAGAACATGAGAAATCAGAAATTCAAGGAGTTTAGGGAACACTTGAAATCCACTACCAGATTTTTTCTCGGCTCCAACAAAGTCATGCAGGTCGCTCTCGGTCGCTCCCCCGCCGATGAGATCCGACCCGGCCTTCACAAGCTTTCAAAGCTATTGCGTGGAGATGCTGGCATGTTTTTCACCAATTTGAATAAGGAAGAGGTTGAAAGACTGTTTAAAGAATTCGAGGAATATGACTTTGCAAGAACAGGAAGCATTGCCACTGAAAAGGTGGACCTCAAAGAGGGTCCTTTAGAGCAGTTCACACACGAGATGGAGCCTTTTCTGCGGAAGCAGGGCATGCCTGTTCGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCGGATTTTGTTGTTTGTGACAAGGGGAAGCCCTTGTCACCTGAGGCTGCTCGTATACTGCGTCTAATGGGAATCAAGATGGCTACATTTCGACTTCACCTAATTTGCAGGTGGAGTCCCGATGAGTTTGAGCTTTACATTGATGGACCGGATGAATCAGATGTTGAATGCTCGTAGGCCTCTATTAAAACGTACAAGATGATATGGAGCTACCTCCTACAAAAATAGATAACAAGATGAGGCGTATGTAATTTACATCTACAGTGCTATATACTAGCGTTTTTTTGGGTAATGTATTTTTAAGAGTTGATTTGTAGGAATGTGAGAGTGAACTATTGTCGAGCTGTACCTTCAAAAATTTCAAATTACTGAGCTACAGTTTTGATTGGTT 967 0.4323 KAQGEANRVEETEKKVENAEVEEEQTRFAIVTLSKTKKKGREHKEVIVNGIKEAAEKYEWVYVFSFQNMRNQKFKEFREHLKSTTRFFLGSNKVMQVALGRSPADEIRPGLHKLSKLLRGDAGMFFTNLNKEEVERLFKEFEEYDFARTGSIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCDKGKPLSPEAARILRLMGIKMATFRLHLICRWSPDEFELYIDGPDESDVECS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01606 250 Coils Coil 2 29 - -
Pste2g01606 250 Gene3D - 146 219 IPR043164 -
Pste2g01606 250 CDD Ribosomal_P0_like 42 205 IPR033867 GO:0000027
Pste2g01606 250 FunFam Ribosome assembly factor mrt4 50 153 - -
Pste2g01606 250 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 26 241 - -
Pste2g01606 250 MobiDBLite consensus disorder prediction 1 20 - -
Pste2g01606 250 Gene3D - 51 232 IPR043141 -
Pste2g01606 250 Pfam Insertion domain in 60S ribosomal protein L10P 147 217 IPR040637 -
Pste2g01606 250 FunFam Ribosome assembly factor mrt4 146 219 - -
Pste2g01606 250 Pfam Ribosomal protein L10 40 141 IPR001790 -
Pste2g01606 250 SUPERFAMILY Ribosomal protein L10-like 41 165 IPR043141 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01606 56 224 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.302 1.49e-09 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01606 2 16902060 16903986 Pste2g01606 2 16902060 16903986 ECH