Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01605 CACACACATAAGCACAAAAAGACATCAACTTTTTCGTTCCTTCCTCGCATTTATTGTTGTTTTCAATTATTCATTCACATTCTCCTCAAAAAATACTATTTTTTCCTCAAAAAATACGATTTTTTCCTAAAAAAAAAACAAACTTTTCCTTATTGTTTTCTGTGTCTCCTCTGTTTCATAGCTTCTGGGTTTTGGTTTCAGACCCACAAAACAGAGTTCCTGCGTAAAGATTAGAGAAAAAAAATGACGGTCGAGAAGATAAACAGTGATTCCGGCGACGAGTTTCCAATAGGAATGCGTGTTCTCGCCGTCGACGACGACCCCACTTGTCTCTTGGTTTTGGAAACTCTCCTCCGAAGATGCCAATATCATGTGACCACGACCAATCAAGCAATAACGGCGCTGGCTCTGTTGAGAGAACACAAAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCTGATATGGATGGATTTAAGCTTCTTGAGCTGGTGGGACTTGAGATGGACCTTCCTGTCATAATGTTATCTGTAAATGGTGATACAAAGCTGGTTATGAAGGGAATTTCTCATGGAGCCTGTGATTATCTGCTCAAACCTGTGAGAATGGAGGAGCTCAAGAACATTTGGCAGCATGTAATTAGGAGGAAGAAGTTTGACTCAAAGGAGAAGAACAAAACCAGCAAGCTAGACAAACCTACTTCTAATAATGGCAATGGACTTGGGTCATCAGGAGTTGGAAATTCAGATCAAAATGAGAAGCTGACTAAAAAAAGGAAGGATCAAGATGAAGATGAAGACGAGGAGCAGGAGAATGATCATGACAATGAGGACCCATCAACCCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTTCTGCTGTTAATCAGCTAGGCATTGACAAGGCTGTACCTAAAAAGATTCTTGATTTGATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCCAGCCATCTCCAGGCATTTTTCTTGTTCTTTAAGTATAGGCTTTATCTGAAAAGAATTAGCTGTGTGGCTAACCAACAGGCTAATATGGTGGCAGCCTTAGGGGGTGCAGATCCATCCTATTTGAGAATGAGTTCTGTGAGTGGGGTTGGACATTTACAAACATTGAGTGGTTGTGGACAACTTCATAACAATGCTTTCAGATCCTTTTCACCCAGTGGAATAATTAATAGATTGAACACTCCTGCTGGTTTGAATGTGCATGGATTTCCTTCTGGAGTTCTTCAGTTGAGTCAATCACAAAATTTAAACAGTAATGATCCTCTTAAGTTCCAGTCACCCATGGTTCCTGTTAATCAGAATGTTCAGGGAATGCCAATGTCTGCTCAAAACAATAAGGGTGTTATTTCTGTTCAAAACCTGACCACTGTTTTTGATGCCAAAACAACTTTTCCTGTCTCAAATAAACTCCCAGATCCAAGACCAAAAATAACCACCTCTGGCTCTCACACTCCAGATGTGGGTATCTCAAACAATGCTTTGATATTGGAACCACGCCTTCAAGGCACACAAGGGAGTGTCAGAATTGAAACTTTATCTTCTTCAGTAGCCTCTCAACATTCAGAATACTCTTTGTCTTTGCTGGATCAAGGTAGATATAGTGATAATTGGACAAGCACTGTGCAGCCATCTGTGATCCCGACAAACTCTTACCCTTCAAGTGAATGTTTTAGCCAGACTAATATATCTCCTACAGATAACATGGCTTCTGTACCATTGCAAGGTGGGAATGTGAGTTGTCCATCCATCACTTCACTATCCAGGCAATCCCACGATGCAATGACACATATGCCCTCTGAAGGAGTGACTTTTACGAACAGACCTGGACATATAAGCAGTAATGTGCGATTTCAAGGGTGGGATGGCCATAATCAGGATGCTACTCACCATTCAAATAATTTATTTGGATCAATAAACTCACTGACTGCAGTCAATAGTACTGCTGTTCCTGCAGGTCACACAGCAGCAAACTCAGCCTTACACAGAAACTTGGACTTCAATTTTTGTGATCCCTTAAAAATGAAGCATGATAGGTTTGTGGAGTTAACTGAAGAGACCTCATTGAAACAACATCAGGGGAATATCATGAACCAGCAGAAGTCTCAACAAAGTCATTTCTCTAGTAATCTTGGTTCACTGGAAGACTTGGTCAGTTCAATGATGAAGCAGGAGAAAGATAAGATGAAATTATTGGATGGAAACCTCATTTGCGATGATTACTCTGGTGGGTTATCTATGTGATAGCAGGTTTGGCAGCACATACCAGCATATCATGCACCCTCGTCGATGAATTTTGTAGTTTTCATTGTGTTAAACCACTTTTGTCTTGTAGTTTACTGTAGGGTTTAGCTTCTCCAGATGACTTTTTCCTGGGTACTCTAGGTTTCTTCCTTTAAGGGCTTTCTAAATTTATACAAATGCATTGTTGTCCAGCAATGCATTATGAAGTTATTAATCACTTTGTTTAATCTCCGTAGATATGTTGGCTTGCAAATTGGACATAGATCTTCTCTCTCAGCCATGCTTGCAGTGAGGAGAGAGAGGCACAGGATCAAGGTGGAACACCACCCAAATGAACCCACTTGAACCCTGTGTCTTGCTCACTTCTCGTTGCACGTGTAGCAGCCGAGTTGCAAATTTATTAAATATTAGGGATCCATAAACTAGATTATAGTGATTATCATGAATGACAATAAACACATATTGCCCCTTTTATGCTTGA 2770 0.4072 MTVEKINSDSGDEFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAITALALLREHKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGDTKLVMKGISHGACDYLLKPVRMEELKNIWQHVIRRKKFDSKEKNKTSKLDKPTSNNGNGLGSSGVGNSDQNEKLTKKRKDQDEDEDEEQENDHDNEDPSTQKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQAFFLFFKYRLYLKRISCVANQQANMVAALGGADPSYLRMSSVSGVGHLQTLSGCGQLHNNAFRSFSPSGIINRLNTPAGLNVHGFPSGVLQLSQSQNLNSNDPLKFQSPMVPVNQNVQGMPMSAQNNKGVISVQNLTTVFDAKTTFPVSNKLPDPRPKITTSGSHTPDVGISNNALILEPRLQGTQGSVRIETLSSSVASQHSEYSLSLLDQGRYSDNWTSTVQPSVIPTNSYPSSECFSQTNISPTDNMASVPLQGGNVSCPSITSLSRQSHDAMTHMPSEGVTFTNRPGHISSNVRFQGWDGHNQDATHHSNNLFGSINSLTAVNSTAVPAGHTAANSALHRNLDFNFCDPLKMKHDRFVELTEETSLKQHQGNIMNQQKSQQSHFSSNLGSLEDLVSSMMKQEKDKMKLLDGNLICDDYSGGLSM 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01605 681 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Pste2g01605 681 MobiDBLite consensus disorder prediction 141 206 - -
Pste2g01605 681 CDD REC_typeB_ARR-like 20 134 - -
Pste2g01605 681 SMART REC_2 18 130 IPR001789 GO:0000160
Pste2g01605 681 MobiDBLite consensus disorder prediction 151 171 - -
Pste2g01605 681 PIRSF RR_ARR_type-B 1 678 IPR017053 GO:0003677|GO:0003700|GO:0009736
Pste2g01605 681 NCBIfam myb-like DNA-binding domain, SHAQKYF class 204 257 IPR006447 GO:0003677
Pste2g01605 681 SUPERFAMILY CheY-like 17 140 IPR011006 -
Pste2g01605 681 Gene3D - 200 269 - -
Pste2g01605 681 Coils Coil 172 192 - -
Pste2g01605 681 MobiDBLite consensus disorder prediction 401 420 - -
Pste2g01605 681 SUPERFAMILY Homeodomain-like 201 260 IPR009057 -
Pste2g01605 681 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 260 IPR017930 -
Pste2g01605 681 FunFam Two-component response regulator 200 269 - -
Pste2g01605 681 FunFam Two-component response regulator 18 178 - -
Pste2g01605 681 Gene3D - 17 153 - -
Pste2g01605 681 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Pste2g01605 681 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 381 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01605 Pste-Chr2 16901193 16905824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01605 1 375 Response Regulator Gene Family AT2G25180 58.462 1.04e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pste2g01605 Response_reg 1.3e-22 CL0304