Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01581 CACGGTACTATAGCAGAATAGTATTTACTTACTCAACACTCTCATAGTAAGAGAACCAAACAAACAAAATCTAAAATAAAACCTTCTTGTACATCACAAAAAGGGATTCTTCATTCTTCTCTTTCTCTCTCTGCGCGGATCTTCTCTGCAATGTAGGTCGCCGGAGAATGGCAAAGTGTCACCGGAACAACGTCGGATCCTTCGCTCTCGACCACCGTCACTCTGCAAAAAATGTCACCGCCGGCAGCCACTTCCGTGTCCTCCGTCGCATGATCTTCGACGCCGTTAGCTGCGGCGGCACCTCCCGGTACCGGTATCGCCAGCGCGGGGAAGACGACGGCGACGGAGGTGACACCAGCTCGGCGGCGAGCCACACAGAGAAGGAGGAGTGCTCGGAGAAGCTATCGGATCTGCTGAACGCAGCGGAGGAGAAGAAGAAGAAGGAAGAGGCATTGGCGGAGCTGAAGCAAGTGGTGAAGGAGCTGCGCGAAGAAGACTTCACGAAGCGGCAAATCGCAGCGGCGAGAGTGAGGTCTCTCGCGAAGGAAGATGCCGAAACGAGAGCGAATCTCGCAATGCTCGGAGCAATTCCTCCGCTCGTTGGAATGCTTGATTCGGAAGATGATCATTCTCAAATCGCATCGCTCTATGCTTTACTCAATCTCGGAATCGGCAACGATGCAAATAAAGCGGCTATGGTGAAAATTGGCGCGGTGCACAAGATGCTGAAGATTATCGAATCAAGTGGCTTCGATTCATCGGTGTCTGAAGCGATTGTAGCGAATTTTCTAGGATTAAGCGCGTTGGATTCGAATAAACCGATAATTGGATCCTCTGGTGCAATACCGTTTCTAGTTAGAACCCTAAAGAATTTAGATGATAGTAAAATGTGTTCCAAATCGCAAGTGAAGCAAGACGCTCTGAGAGCTTTGTACAATCTTTCTATCTGCCAGAGCAACGTGTCAGTGGTTTTGGAAACTGATTTGGTTAGGTTATTAGTGAACGGGATAGGGGACATGGAAGTGAGTGAGAGGAGTCTGGCGATTCTGAGCAATTTGGTGTCAACTCCGGAGGGTAGAAAAGGCATTAGCAGTGTGAGCGATGCGATTCCGATTCTTGTGGACGTATTGAGCTGGACGGATTCGCCAGAGTGTCAAGAGAAGGCGTCGTACGTTTTGATGATTATGGCACACAAAGCGTACGGTGACAGGCGGGTGATGATAGAGGCCGGGATTGTGTCTTCGCTGCTTGAGCTGACGCTTGTGGGAACCACGCTGGCTCAGAAGAGGGCCTCCAGAATATTGGAGTGCTTGAGGGTGGATAAGGGGAAACAGGTTTCTGGAAGCTATGGTGGAAACTTGGGTGTCTCTGCTCCTATTTGTGGATCTTCTTCTTCCAGAGGAGGGAAAGAGTGTTTGGCGGAGGGGGAAAGTGAGGAAAAGAAAGCGGTGAAACAATTAGTGCAGCAGAGTTTGCAGAGTAATATGATGAAAATTGTCAAGAGGGCCAACTTGCATCAGGATTTCGTTCCATCTTCCCATTTTGCTTCACTCACTTCCACTTCCACTTCCACTTCCACTTCCAAGAGCTTGCCATTTTGAAGAATAATCAATCAAATAAACCATCACATTCTAGTTTCCAGGACTTTTGCTTCTTTTAGTTATTTGTTAGCACTGATAACATATTATACAAGTAATAATAATCTCTACTTCAATTGTCTCGCTTTAGATTCTGTTGTTTTTTGGGTATCTGCTGAGGACACACTGTTTCTTTGGCGTGAGCTATTTGAGCATGTGATGA 1800 0.475 MAKCHRNNVGSFALDHRHSAKNVTAGSHFRVLRRMIFDAVSCGGTSRYRYRQRGEDDGDGGDTSSAASHTEKEECSEKLSDLLNAAEEKKKKEEALAELKQVVKELREEDFTKRQIAAARVRSLAKEDAETRANLAMLGAIPPLVGMLDSEDDHSQIASLYALLNLGIGNDANKAAMVKIGAVHKMLKIIESSGFDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLKNLDDSKMCSKSQVKQDALRALYNLSICQSNVSVVLETDLVRLLVNGIGDMEVSERSLAILSNLVSTPEGRKGISSVSDAIPILVDVLSWTDSPECQEKASYVLMIMAHKAYGDRRVMIEAGIVSSLLELTLVGTTLAQKRASRILECLRVDKGKQVSGSYGGNLGVSAPICGSSSSRGGKECLAEGESEEKKAVKQLVQQSLQSNMMKIVKRANLHQDFVPSSHFASLTSTSTSTSTSKSLPF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01581 477 SMART arm_5 300 342 IPR000225 GO:0005515
Pste2g01581 477 SMART arm_5 128 168 IPR000225 GO:0005515
Pste2g01581 477 SMART arm_5 170 212 IPR000225 GO:0005515
Pste2g01581 477 SMART arm_5 213 260 IPR000225 GO:0005515
Pste2g01581 477 SMART arm_5 261 299 IPR000225 GO:0005515
Pste2g01581 477 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 25 477 - -
Pste2g01581 477 Coils Coil 72 109 - -
Pste2g01581 477 Gene3D - 243 393 IPR011989 -
Pste2g01581 477 MobiDBLite consensus disorder prediction 49 78 - -
Pste2g01581 477 Gene3D - 61 242 IPR011989 -
Pste2g01581 477 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 224 273 IPR000225 GO:0005515
Pste2g01581 477 SUPERFAMILY ARM repeat 98 383 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01581 Pste-Chr2 16755733 16757636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01581 87 383 U-box Gene Family AT2G23140 31.879 4.47e-31 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00163 8 923223 926429 Pste2g01581 2 16755733 16757636 PCT