Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01566 GTTACTCTTAACAATAAACCAAAGGGGAGAAACGAGTTTAGTTAGGAGTTAGGGTTTACGAGGCGAAGAAGATGGGAAGAAGAAACAGTGGAAGGTCTCTCCAAGAAACCCTCCGTCGCCGACTTGAGTTTTGCAAAAACAGATACTCCACCGCCGAAGAATTCGCCAACCATCTCCGCTCCACTTACCCGGATTACCACCGAACCAAGCACCAAACCCTAATTCGATTTGTTCAGGAAGCTCTTCATTCCGCCGCCACGCTTAATCACACTACCACACCCAAGCGTTTCGACGACGACGGCAACGACGGAGTAGAGCATCGAAGCGAGTCTCGAAAGCGTCGGAAGAAAATCGACGAAAATGAAGAGAAATTACAGAGGATGGAAGCGTTACACTCCCGAAGGAGGGTGCAAAGGTCTTCCTCAACGTCCTCTGCTTCGGATAGCGACGATGAAGAAGCCGTGTCGACGTCGGAGGACGCAATTTACGGGGAGAAGGTGGAGCCTCAGTTTGATTTGATGAAGACAATGCTGCGGAAGTCGTATACGCCGAAGAAGGAGGAGAAGAACGTGGAGTTGGAGGTGGGGAATAGCGTTAAGGGCACTGCTACTAGTACTCTTGTGAATGAGGCAGTAGTGAATAGCAGTAAGGGCACTGCGACTAGCACTCTTTTGAATGAGGAGAGGAAGCAATCGCTTTCTGACGGGAAGGACGGACCGATGTTTAAGGATTTGGGTGGGATGAAGGAGGTTTTGGAGGAGCTGAAGATGGAAGTGATGGTGCCTTTGTTCCATCCCCAATTGCCTAGACACTTAGGTGTGAAGCCATTGGGTGGCATTTTGTTGCATGGACCACCTGGCTGTGGGAAGACTAAACTTGCTCATGCTATAGCTAATGAGACCGCTCTTCCTTTCTATAAGATTTCGGCTACTGAGGTCGTTTCTGGAGTCTCCGGTGCATCTGAAGAAAATATTAGAGCGCTTTTTGCTAAAGCGTATAGGACTGCACCTTCAATCATCTTTGTTGATGAGATTGACGCAATTGCTTCTAAAAGAGAGAATTTGCAGCGTGAGATGGAGAAGCGCATTGTGACACAATTAATGACTTGCATGGATCAATCTAATAGGCTTCTTCAACCAACAGATGATTTAGAGGCTTCTGATGATCACCATCATCCTGGATATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTCTTGACCCTGCCCTGCGAAGGCCTGGTCGGTTTGATCGTGAGATTATCATTGGCAATCCCAATGAATTTGCCAGGGAGGAGATCCTTTCTGTGCTTACTTGCAATCTTAGACTTGAGGGTTTATTTGACCTACGGAAAATAGCCAATGTTACGTCAGGATTTGTTGGTGCTGATTTGGCAGCTCTGGTTGACAAGGCTGGTAATCTGGCAATGAAGAGAATAATTGATGAAAGGAAACGTCAATTATCTCAAGATCTCACGAGCAAGCATGCTGAAGATTGGTGGAGGGAACCTTGGTCAGCTGAAGAAATAGACAAGCTTGCCATCAAAATGTCTGATTTTGAGGAAGCAGCCAAAAAGGTGCAACCTTCATTAAGAAGAGAAGGGTTCTCTCCCATTCCTAATGTAAAATGGGAAGATGTTGGAGGGCTTGATCTTTTAAGAAAGGAGTTTGAACGTTACATTGTTAATCGTATAAAATATCCGGAAGATTACGAGGGGCTTGGGGTGGACCTTGAGACAGGATTTTTGCTTTATGGACCTCCTGGTTGTGGTAAAACATTGATTGCCAAAGCTGTTGCCAATGAGGCAGGGGCTAATTTTATTCATGTTAAGGGACCTGAACTTTTGAGTAAATATGTTGGAGATAGTGAGCTTGCAGTTCGTACAAAGTTTAGCCTTGCAAGGGCATGTGCACCTTGTATACTTTTTTTTGACGAGGTGGATGCCTTGACAACTAACCGTGGTAAAGAAGGTGGTTGGGTTATTGAACGAGTGTTGAATCAGTTACTTGTTGAGTTAGATGGTGCAGAGCAACGGCGAGGTGTTTTTGTGATTGGTGCTACAAATAGGCCTGAGGTGATTGATCGCGCTGTCCTGCGGCCTGGTAGGTTTGGTAAACTTCTTTATGTTCCACTCCCAAGCCCAGATGAGCGAGTTTTGATATTGAAAGCTCTTGCAAGGAAGAGGGCCCTTGATGCCTCTGTGGATTTGAGTGCCATAGCAAAATTGGAAGCTTGTGAAAACCTTAGTGGCGCTGATCTTGCTGCATTGATGAATGAAGCCGCAATGGCTGCTGTTGACGAGAAATCCACCTCAACTGAGAGAACTTGCGGTACCTTGATAATCAAGAGAAATCATTTTGAGGTAGCACTGAGTAAAGTCTCTCCGTCTGTGTCAGACAGGCAAAAGCAGTACTATCAGCACTTGTCAGAGAGCTTTAAAGCAGCGTGAGCAGCATGTCTTCGACGTTTTTATTTTAGCCGGTGTGGTCGATTTGCTTTATGAAAGGGGTCTTTGCTTTTGTATGAGATGTACATGTTTCCTGCAATCAGGATATAAATTTTGGCGAATAGTTATATTTACTGTTCACTTTATCCATAATATGGCCTATAGAGTTTTTCTAAACAGTTATTACTAGAATATAAATAAGAGTTTTTCTAAACAGTGAT 2671 0.4481 MGRRNSGRSLQETLRRRLEFCKNRYSTAEEFANHLRSTYPDYHRTKHQTLIRFVQEALHSAATLNHTTTPKRFDDDGNDGVEHRSESRKRRKKIDENEEKLQRMEALHSRRRVQRSSSTSSASDSDDEEAVSTSEDAIYGEKVEPQFDLMKTMLRKSYTPKKEEKNVELEVGNSVKGTATSTLVNEAVVNSSKGTATSTLLNEERKQSLSDGKDGPMFKDLGGMKEVLEELKMEVMVPLFHPQLPRHLGVKPLGGILLHGPPGCGKTKLAHAIANETALPFYKISATEVVSGVSGASEENIRALFAKAYRTAPSIIFVDEIDAIASKRENLQREMEKRIVTQLMTCMDQSNRLLQPTDDLEASDDHHHPGYVLVIGATNRPDALDPALRRPGRFDREIIIGNPNEFAREEILSVLTCNLRLEGLFDLRKIANVTSGFVGADLAALVDKAGNLAMKRIIDERKRQLSQDLTSKHAEDWWREPWSAEEIDKLAIKMSDFEEAAKKVQPSLRREGFSPIPNVKWEDVGGLDLLRKEFERYIVNRIKYPEDYEGLGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHVKGPELLSKYVGDSELAVRTKFSLARACAPCILFFDEVDALTTNRGKEGGWVIERVLNQLLVELDGAEQRRGVFVIGATNRPEVIDRAVLRPGRFGKLLYVPLPSPDERVLILKALARKRALDASVDLSAIAKLEACENLSGADLAALMNEAAMAAVDEKSTSTERTCGTLIIKRNHFEVALSKVSPSVSDRQKQYYQHLSESFKAA 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01566 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 790 IPR027417 -
Pste2g01566 793 ProSitePatterns AAA-protein family signature. 372 390 IPR003960 GO:0005524|GO:0016887
Pste2g01566 793 Gene3D - 205 401 IPR027417 -
Pste2g01566 793 MobiDBLite consensus disorder prediction 113 127 - -
Pste2g01566 793 Gene3D - 517 783 IPR027417 -
Pste2g01566 793 Gene3D - 403 511 - -
Pste2g01566 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 511 IPR027417 -
Pste2g01566 793 FunFam ATPase, AAA family protein 517 696 - -
Pste2g01566 793 Gene3D - 690 769 - -
Pste2g01566 793 MobiDBLite consensus disorder prediction 69 112 - -
Pste2g01566 793 Coils Coil 87 107 - -
Pste2g01566 793 MobiDBLite consensus disorder prediction 63 143 - -
Pste2g01566 793 FunFam Cell division control protein 48 homolog C 403 511 - -
Pste2g01566 793 PANTHER AAA-FAMILY ATPASE 93 791 - -
Pste2g01566 793 Pfam ATPase family associated with various cellular activities (AAA) 256 401 IPR003959 GO:0005524|GO:0016887
Pste2g01566 793 Pfam ATPase family associated with various cellular activities (AAA) 560 688 IPR003959 GO:0005524|GO:0016887
Pste2g01566 793 Pfam AAA+ lid domain 711 749 IPR041569 -
Pste2g01566 793 Pfam AAA+ lid domain 425 460 IPR041569 -
Pste2g01566 793 ProSitePatterns AAA-protein family signature. 659 677 IPR003960 GO:0005524|GO:0016887
Pste2g01566 793 SMART AAA_5 555 691 IPR003593 GO:0016887
Pste2g01566 793 SMART AAA_5 252 404 IPR003593 GO:0016887
Pste2g01566 793 FunFam Ribosome biogenesis ATPase RIX7 206 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01566 Pste-Chr2 16659382 16665641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01566 490 791 Calmodulin-binding Proteins AT3G56690 44.408 1.27e-68 243