Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01551 ATGTTAGCTGATCGTTACCCCCACCAAGGAAAAACATGGATTGGATCTGTGAACCCAAACTTCCGTGAGACAAGCCTTCGAATCAGATACATTGCGGCCATGTACTGGTCTATCACTACCATGACCACTGTAGGTTATGGTGACCTCCATGCGGTCAACACCATCGAAATGATCTTCATTATTTTCTACATGCTCTATAACCTTGGCCTCACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACCATGGAATTTTCTTTTCTGCCAAAGTTTTCGTTCTCCTTCTCTCTACCATCTTTATTACTTTCTTCAGTTCAGATTCTTGACAACTGTAAGAGAAATAGCATTGAAGCAGCATCAAACTTCGTGTGCCGAAATCGGTTGCCTCCAAGGTTAAAAGAGCAGATCTTGGCTTACATGTGCTTAAGATTTAAGGCGGAGAGCTTGAATCAGCATAAGCTTATTAAACAGCTTCCAAAGTCGATTTGCAAAGGCATCTGCCAGCACTTGTTTTTTGCAACTGTAGAAAAAGTCTATCTTTTCAAAGGCGTCTCAAAAGAAATTATTTTGTCCCTTGTTGCAACAATGAAAGCAGAATACATACCACCTAGAGAGGATGTTATCATGCAAAATGAAGCCCCCGATGACGTTTACATTATAGTGTCTGGAGAAGTGGAGATCATCGAAAATGATATGGAGAAAGAGAAAATTTTAGGAACTCTACATACTGGGGACATGTTTGGAGAGGTTGGTGCACTTTGTTGTAGACCTCAGAGCTTTACCTACAGAACCAAGACTCTTACACAGCTCCTCAGACTGAAGACCAGTACTCTTATAGAATCAATGCAGGTTAAAAAAGAAGACAACATACAAATACTAAAAAATTTTCTTCAGCATTTCAAGCAGCTTAAGGATCTAACTATCAAAGATTTCATGGTGGAGAATGTGGAAGAGGAGGATCCTAACATGGCTGTGAATTTGTTAACTGTAGCAAGCACAGGTAATGCCGCTTTTCTTGAGGAGCTTCTGAGAGCAGGTTTGGATCCTGACATCGGAGACTCGAAAGGGAAGACTCCATTGCACATAGCAGCATCAAATGGGCATGAAGACTGTGTTAAAGTCTTACTCAAGCATGCATGCAACATACACATAAGAGACATGGATGGTAACACTGCATTATGGGATGCTATAGCATCTAAACATTACTCCATATTTCGGATCCTCTTCCAGCTTGCTACTTTCGCTGATCCAAACACAGCAGGTGATCTCCTGTGTACAGCAGCAAAAAGAAATGAATTAACAGTGATGGACGATCTTCTAAAACAAGGACTAAATGTTGACTCTAGAGATTACCATGATACAACAGCAATCCAAATTGCCATGGCAGAAAATCATGTGGACATGGTTCAGTTGCTTGTCATGAATGGTGCAAATGTCTCTGATGTGCATAATCATGAATTTTGTTCATCCACCTTGAATAAAATGTTGCAGAAACGTGAAATCGGGCATCTAATTAATGTAAGTGAGGTCATGGTCGGTGACGCTGTATTAAAGGAGAGACAACAAGAGCGAGAGCACAATGGGGAAAGATCTAATGGCCCAAAGTTTCAAAGAGTAAGCATATATAGAGGTCACCCTGTAGTAAGAAGAGAAAAAGGCATCATGGAAGCTGGGAAGCTAATAAGGTTGCCTGATTCATTAGAGGACCTCAAAGTTATTGCAGGTGAGAAGTTTGGGTTTGATGCGAAAGATGCTATACTGACAAATGAAGAAGGAGCAGAAATAGATTCTATCTATGTGATCAGAGATAATGATAAACTTTTTTTTGTTGAATAAGTTGAGATGGAAAAAAGCAAACTGTAAATATATAATCTTGCTCAACAGATTTTCATTTAATTTTCTTTTTGTGTTGGTCATTTTGTCTTCTTCCAATAGCCAGTTAAAAAGAAGTGGCTTGGTTGAAAACTTATTATAGTTGGTTTTTGGACTTCCAATAATTGAAAAACTATTTCCAA 2036 0.3929 MLADRYPHQGKTWIGSVNPNFRETSLRIRYIAAMYWSITTMTTVGYGDLHAVNTIEMIFIIFYMLYNLGLTAYLIGNMTNLVVEGTRRTMEFSFLPKFSFSFSLPSLLLSSVQILDNCKRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHKLIKQLPKSICKGICQHLFFATVEKVYLFKGVSKEIILSLVATMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIIENDMEKEKILGTLHTGDMFGEVGALCCRPQSFTYRTKTLTQLLRLKTSTLIESMQVKKEDNIQILKNFLQHFKQLKDLTIKDFMVENVEEEDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKGKTPLHIAASNGHEDCVKVLLKHACNIHIRDMDGNTALWDAIASKHYSIFRILFQLATFADPNTAGDLLCTAAKRNELTVMDDLLKQGLNVDSRDYHDTTAIQIAMAENHVDMVQLLVMNGANVSDVHNHEFCSSTLNKMLQKREIGHLINVSEVMVGDAVLKERQQEREHNGERSNGPKFQRVSIYRGHPVVRREKGIMEAGKLIRLPDSLEDLKVIAGEKFGFDAKDAILTNEEGAEIDSIYVIRDNDKLFFVE 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01551 618 Pfam KHA, dimerisation domain of potassium ion channel 545 616 IPR021789 -
Pste2g01551 618 Gene3D - 331 510 IPR036770 -
Pste2g01551 618 PRINTS Ankyrin repeat signature 475 489 IPR002110 GO:0005515
Pste2g01551 618 PRINTS Ankyrin repeat signature 363 378 IPR002110 GO:0005515
Pste2g01551 618 ProSiteProfiles Ankyrin repeat profile. 362 394 IPR002110 GO:0005515
Pste2g01551 618 SUPERFAMILY Voltage-gated potassium channels 21 97 - -
Pste2g01551 618 ProSiteProfiles KHA domain profile. 545 618 IPR021789 -
Pste2g01551 618 PANTHER POTASSIUM CHANNEL AKT1 1 617 IPR045319 GO:0005249|GO:0006813
Pste2g01551 618 SMART cnmp_10 187 304 IPR000595 -
Pste2g01551 618 CDD CAP_ED 187 300 IPR000595 -
Pste2g01551 618 Gene3D Jelly Rolls 154 329 IPR014710 -
Pste2g01551 618 ProSiteProfiles cAMP/cGMP binding motif profile. 187 306 IPR000595 -
Pste2g01551 618 SUPERFAMILY cAMP-binding domain-like 120 306 IPR018490 -
Pste2g01551 618 ProSiteProfiles Ankyrin repeat region circular profile. 362 393 - -
Pste2g01551 618 Pfam Ankyrin repeats (3 copies) 338 425 IPR002110 GO:0005515
Pste2g01551 618 Gene3D - 7 83 - -
Pste2g01551 618 PRINTS EAG/ELK/ERG potassium channel family signature 30 47 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01551 618 PRINTS EAG/ELK/ERG potassium channel family signature 74 83 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01551 618 PRINTS EAG/ELK/ERG potassium channel family signature 56 67 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01551 618 Pfam Cyclic nucleotide-binding domain 207 289 IPR000595 -
Pste2g01551 618 ProSiteProfiles Ankyrin repeat profile. 459 491 IPR002110 GO:0005515
Pste2g01551 618 Pfam Ion transport protein 17 89 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g01551 618 ProSiteProfiles Ankyrin repeat region circular profile. 459 487 - -
Pste2g01551 618 SUPERFAMILY Ankyrin repeat 294 492 IPR036770 -
Pste2g01551 618 SMART ANK_2a 329 358 IPR002110 GO:0005515
Pste2g01551 618 SMART ANK_2a 362 391 IPR002110 GO:0005515
Pste2g01551 618 SMART ANK_2a 459 488 IPR002110 GO:0005515
Pste2g01551 618 SMART ANK_2a 395 426 IPR002110 GO:0005515
Pste2g01551 618 FunFam Potassium channel KAT2 175 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01551 Pste-Chr2 16547365 16550383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01551 1 367 Ion Channels AT4G22200 70.620 0.0 531