Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01545 CTCATTCCCTCTGTCCCTTTATTCACAACCAAATCTTTCTTTTCCTTTTCCATGGAACCAACCTGCGTCGACACTTCGCTCAATCTCAACGTTATCTCCGCTCCACTTCCACACACCGACCTTACGGCAGAATTTTTGGTTCAAGAGTTGCAGCGTCTAAGCAGTGAGAATAAGAGGCTAACTGAGACGCTGAACCAAGTGTGCGACAACTATGCTGCGTTGCATAAACATTTGAGTGAATTCAGGCAAGTGAAGAACGCAAATAGTGATAAAGAAACCACAGCGTCGCTCAAGAGAAAGGCGGAGAGTGAGAATTGCGTGAATCTGTTTGGTATTAATTCCTATGCTGAGTGCAGCACTGTCACTGAGGAAGACACATTCAAAAGGCCCAAACATAGCCTCTCGCCAAAGGTTTCCAAAGTTTTTGTACGGACAGATGCATCCGATACCAGCTTATATGTGAGGGACGGATATCAATGGAGAAAATATGGTCAAAAAGTGACCAGAGATAACCCCTCTCCTAGGGCTTACTTCAAGTGTTCTTATGCCCCAAGCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGTAGAAGATCCAAGTGTATTGGTAACAACATACGAAGGAGAGCACAACCATGGGCAACAGCAACCTGAACTATCAGTGAACTCAAGCCAAAGTGAAACGACTACAGGATCAGTAGCTGCTACTAATTCCTCACCAATGAATAGGTATGCGGCTCCAATTGTAACGCTTGACTTGGTCCAGTCAAGAGTGGTTGACATTAATGAGCAAAAGTCTTCTATACACAACCTTTTAGTTCGACAAATGGCTACTTCTTTGACTAGAGATCCCAATTTCACAGCCGCACTTGCTACTGCCCTCTCAGGAACCATTCTAGATACAAAACCTTCAATTTGAGATATCTGTTTCACTCACCATCTATCTTATATATATATCAATCATTTTTCTTCCTTGCTTTTAATCCATAATAAACTCCTATTATACACAAATATTATTCTATGTGCATCATCGCCATAAAATTACATTATATTTATATTATACTACTATACAAGTAAATTTT 1081 0.4117 MEPTCVDTSLNLNVISAPLPHTDLTAEFLVQELQRLSSENKRLTETLNQVCDNYAALHKHLSEFRQVKNANSDKETTASLKRKAESENCVNLFGINSYAECSTVTEEDTFKRPKHSLSPKVSKVFVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPSCPVKKKVQRSVEDPSVLVTTYEGEHNHGQQQPELSVNSSQSETTTGSVAATNSSPMNRYAAPIVTLDLVQSRVVDINEQKSSIHNLLVRQMATSLTRDPNFTAALATALSGTILDTKPSI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01545 288 Gene3D WRKY domain 121 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g01545 288 MobiDBLite consensus disorder prediction 192 222 - -
Pste2g01545 288 Coils Coil 26 53 - -
Pste2g01545 288 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 281 IPR044810 GO:0003700
Pste2g01545 288 Pfam WRKY DNA -binding domain 139 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01545 288 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g01545 288 FunFam WRKY transcription factor 40 122 199 - -
Pste2g01545 288 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01545 288 ProSiteProfiles WRKY domain profile. 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01545 Pste-Chr2 16492958 16494291 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01545 6 281 WRKY Transcription Factor Family AT1G80840 45.993 1.36e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g01545 WRKY 3.6e-24 CL0274