Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01543 AAAGAAACTCTTGAAGTGAAGCTGCAAAGTGTGAAAGAGGAGAATCGTACTCTAAGACTGATGATGGAAACTCTGAGCAGCAAATGCCGAGAGCTTCAGTCTTATCTTCAAGACATCAATAATGCAGAACAAGGGGGCACCAAGTCACACCAAAGTGGATCAGTATTAGCTAGACCTGAGTTTTTCATAGCACAAAAGCCATCACAAATCTTTGTTAAAACTCATCCCAAGGACAACAGTTTGATGGTAAAAGATGGTTATCAGTGGAAGAAGTATGGACAGAAGAAGGCTACTAAAGACAACCCTTCACCTAGAGCTTATTTCAAGTGCTACCTGGCTCCTAGCTGCCCCGTCAAGAAAAGGGTCCAAAGAAGCATAAAGGATAGGTCTATCCTTGTTGCAACTTATGAAGGAAAGCACAACCATGGTGTTTTCCGTGATTTACTCAAGCCATCATCTTCTACTGAAACCTCTAATAATTTACCTATGACAATCATGCCAAACGACAAAGCTACTATGAACATTAACCTTTGTCTATGTAATCGAACCCAAACAGATATAAGAACTTGTGATTGTGCTACGCAACAGAACGACCGTAGCAGCAACAGCAGAATTAAAGATTGTGTAAGTTTTCTAGTCAAAGATCCTGACTTCATCATACCATTAGCTGAAGCAATTGTCCACTCCATCAAAAGCCAGAGTAAGCAAAAGCAAGTGAGTCTCAACTTGAATTTGGGTGTTCTAGAACCTCACGTGTGA 759 0.4071 KETLEVKLQSVKEENRTLRLMMETLSSKCRELQSYLQDINNAEQGGTKSHQSGSVLARPEFFIAQKPSQIFVKTHPKDNSLMVKDGYQWKKYGQKKATKDNPSPRAYFKCYLAPSCPVKKRVQRSIKDRSILVATYEGKHNHGVFRDLLKPSSSTETSNNLPMTIMPNDKATMNINLCLCNRTQTDIRTCDCATQQNDRSSNSRIKDCVSFLVKDPDFIIPLAEAIVHSIKSQSKQKQVSLNLNLGVLEPHV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01543 252 Pfam WRKY DNA -binding domain 84 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01543 252 ProSiteProfiles WRKY domain profile. 78 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01543 252 SMART WRKY_cls 83 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01543 252 Gene3D WRKY domain 68 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g01543 252 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 68 233 IPR044810 GO:0003700
Pste2g01543 252 Coils Coil 1 28 - -
Pste2g01543 252 SUPERFAMILY WRKY DNA-binding domain 80 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01543 Pste-Chr2 16459091 16460147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01543 58 233 WRKY Transcription Factor Family AT1G80840 40.860 1.43e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g01543 WRKY 1.7e-20 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00333 8 1793756 1796127 Pste2g01543 2 16459091 16460147 PCT