Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01531 ATGGCTATACATACACAATTCCATCTTATTACATACTCGCAAGAGATTGTAGATGGACAGCCTATTTTTGTCTCTTCAAATTGTCTTCCTGTCAAGGCTTTGAAATTTGAACCTGCAGGTCATGCTTTCCATTCTGCTGCACTTAAACGTCTCGGTGTACAAGAAGATAACAATGATGCTGATGATAAAAAAGTGGTTGATGATAAGGAACAAACTTATCTCCCATCTGATTCTTATAGCAGCAAGAGCAAAAAGAAATCTGGTACTGGAGACAAGCAACAAGATCACTATGCGTTATTGGGTCTGGGTCATTTAAGGTATCTTGCTACAGAGGATCAAATTCGGAAAAGCTATCGTGAAACTGCCTTGAGGTTTCATCCTGATAAACAGGCTGCTCTTCTTCTTGCTGAGGAAACTGAAGCTGCAAAACAAGCAAAAAAGGATGAAATAGAAAGTCACTTTAAGGCAATCCAGGAAGCATATGAAGTGTTGATTGATCCTGTGAAGCGAAGAATTTATGATTCCACAGATGAGTTTGATGATGAGATTCCCACTGATTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCGGTAAATCAACCTATTCCATCACTAGGTGATGATAATACTAAACTAAAAGAAGTTGATAATTTCTACAATTTTTGGTACTCCTTTAAAAGTTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAGTCTCGAGACCACAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGACAGAAAAAGCCAGGAAGGAAGATTATGCCCGGATACGCACGCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATATTGAGAAGAAAGGAAGAAGAAAGAGCTGAGAAACAAAGGAAAAAGGAGGCCAAGATCCTGGCAAAGAAGTTGCAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAACGGCTAAGAAAAGAGAAGGAAGAAAGACACGCTACAGAAGCTGCTTTACAACAGAAGAAGGTGAAAGAGAAAGAGAAAAAGCTCTTGCGGAAGGAGCGTGCACGACTTCGGGCTCTCTCAGGACCTCTTTTATCACACTGTTTACTTGATATTTCTGATGGTGATGTAGAAATGCTTTGCATGTCACTTGATATTGAGCAGCTGAGGAGTCTCTGTGAGAACATGGAAGGCAGACAGGTGCTATTAGAGCAAGCAAAAATTTTAAGAGATAAGCTGTGTTCTAAGAAAGAGGTGGTTGATGAGAAAACTAATCAACAAAATGCCAACGGTTCCATCAAGGCTAATGGCAGTGCATCACTAAGCAACACAGAGAAGAAGGAGAAACCTTGGAATAAAGAAGAGATTGATCTGTTGAGAAAAGGGATGCATAAATATCCCAAAGGAACTTCGCGGAGATGGGAGGTTATTTCAGAATACATTGGTACTGGAAGATCAGTTGAAGAAATTATGAAGGCAACTAAAACTGTACTCCTCCAGAAACCTGATTCCTCAAAAGCTTTTGACACATTTCTTGAGAAAAGGAAACCTGGTGCACAATCAATTGAGTCTCCCCTGACAACCAGAGAAGAATTAGAAGGGGTATCAACTCCTACCTCCTCAACAAGTAACATAGAAGACTCTCATAGCAAAAGTACCGATGACCAGAACTCTACAACTGCTAATGGAGTTTCTTCCAGTTCAGAACAAGATGTGTGGTCTACAGTGCAGGAACGAGCACTGGTTCAAGCTTTAAAAGCCTTTCCAAAGGAAACAAGCCAGAGATGGGAGCGGGTTGCAGCAGCTGTACCTGGGAAGACTGTGAATCAGTGCAAGAAAAAATTTGCACTGATGAAGGAGAATTTCAGGAACAAGAAAACTGCAGTCTAA 1917 0.4121 MAIHTQFHLITYSQEIVDGQPIFVSSNCLPVKALKFEPAGHAFHSAALKRLGVQEDNNDADDKKVVDDKEQTYLPSDSYSSKSKKKSGTGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRFHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSLGDDNTKLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLTEKARKEDYARIRTLVDNAYKRDPRILRRKEEERAEKQRKKEAKILAKKLQEEEAARIAEEERLRKEKEERHATEAALQQKKVKEKEKKLLRKERARLRALSGPLLSHCLLDISDGDVEMLCMSLDIEQLRSLCENMEGRQVLLEQAKILRDKLCSKKEVVDEKTNQQNANGSIKANGSASLSNTEKKEKPWNKEEIDLLRKGMHKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKAFDTFLEKRKPGAQSIESPLTTREELEGVSTPTSSTSNIEDSHSKSTDDQNSTTANGVSSSSEQDVWSTVQERALVQALKAFPKETSQRWERVAAAVPGKTVNQCKKKFALMKENFRNKKTAV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01531 638 Pfam DnaJ domain 95 174 IPR001623 -
Pste2g01531 638 Pfam Myb-like DNA-binding domain 581 624 IPR001005 -
Pste2g01531 638 MobiDBLite consensus disorder prediction 57 71 - -
Pste2g01531 638 SMART sant 578 630 IPR001005 -
Pste2g01531 638 SMART sant 456 509 IPR001005 -
Pste2g01531 638 Coils Coil 295 369 - -
Pste2g01531 638 CDD SANT 459 501 IPR001005 -
Pste2g01531 638 MobiDBLite consensus disorder prediction 430 462 - -
Pste2g01531 638 CDD SANT 582 628 IPR001005 -
Pste2g01531 638 Gene3D - 572 638 - -
Pste2g01531 638 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 9 637 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Pste2g01531 638 MobiDBLite consensus disorder prediction 530 556 - -
Pste2g01531 638 CDD DnaJ 95 166 IPR001623 -
Pste2g01531 638 MobiDBLite consensus disorder prediction 520 580 - -
Pste2g01531 638 SUPERFAMILY Homeodomain-like 580 634 IPR009057 -
Pste2g01531 638 ProSiteProfiles Myb-like domain profile. 574 624 IPR001005 -
Pste2g01531 638 SMART dnaj_3 94 169 IPR001623 -
Pste2g01531 638 Coils Coil 395 415 - -
Pste2g01531 638 PRINTS DnaJ domain signature 48 66 IPR001623 -
Pste2g01531 638 PRINTS DnaJ domain signature 118 133 IPR001623 -
Pste2g01531 638 PRINTS DnaJ domain signature 149 169 IPR001623 -
Pste2g01531 638 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Pste2g01531 638 SUPERFAMILY Chaperone J-domain 85 173 IPR036869 -
Pste2g01531 638 FunFam Myb family transcription factor 576 636 - -
Pste2g01531 638 Gene3D DnaJ domain 78 187 IPR036869 -
Pste2g01531 638 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Pste2g01531 638 MobiDBLite consensus disorder prediction 563 580 - -
Pste2g01531 638 MobiDBLite consensus disorder prediction 433 454 - -
Pste2g01531 638 Gene3D - 451 510 - -
Pste2g01531 638 MobiDBLite consensus disorder prediction 57 92 - -
Pste2g01531 638 SUPERFAMILY Homeodomain-like 454 501 IPR009057 -
Pste2g01531 638 ProSiteProfiles SANT domain profile. 577 632 IPR017884 -
Pste2g01531 638 ProSiteProfiles Myb-like domain profile. 452 507 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01531 Pste-Chr2 16389358 16391274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01531 96 295 C2H2 Transcription Factor Family AT1G74250 28.870 3.72e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g01531 DnaJ 4.9e-17 CL0392