Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01524 ATGGAAGTATCAGATTTGCAAAAGAAGAAGAAGCAGACAGTCACAGTCACAGTTGGCGGCGGCGGCGTCGGCGGAGGTGGAGGCGGAGGTAGTAGTAATCATCCAGTTGTTCACCAACAAGGCTCCTCATCGCATGTGGTGGTCCCCTCCAACTCTTCATCGTCGTCGTCTTCTGCCATAGACGCCTCCCTAGCCATCGCCACCAGATCTGATGAGTCCGCCCAACAACTCTCCACAACCACAGTTGCCCCTCCAAAGCGATCCACCAAGGACAGGCACACCAAAGTGGACGGCCGCGGCCGCAGAATTCGAATGCCCGCCACCTGCGCCGCTAGGGTTTTCCAATTGACTCGAGAATTGGGCCACAAGTCCGACGGGGAGACCATCGAGTGGCTCCTCCACCAGGCCGAGCCCGCCATCATCGCCGCCACCGGAACCGGAACCATCCCAGCCAATTTCTCCACCCTCAACGTCTCACTCCGTAGCAGCGGCTCCACCCTCTCGGCCCCGCCCTCCAAGTCTGCGCCCCACACCTTTGCCCTCGCCCACCACCCTTACGACGAACCTTTTCAACACCCCGCTTTACTAGGCTTCCACCACCACCACCAGCACCAGCACCAGCACCAGCACCACCACCAGCAACAGCAACAGCTTCTCTCCGCCGATCAAATCGCTGAAGCGCTTCCCAGCGAGTCCGGCGAGAGCTACCTAAGAAAACGGTACCGGGAGGATCTGTTCAAAGACGACAACATAAGCAGGCAATCGCAGAACGAGAGCGGTGAGGGGTCTTCCCCGAAAGCTCCCAACATAGAGTTACCGAAGCAACAAAACGAAGGTGTTGTTCGGGTTCCAACAGCGATGTGGGCGGGTGGGCCCCCTGGGAGCACAATTTGGATGCTTCCCGTAACACCCGGTTCTTCTTCCTCTTCTTCTTCTTCGTCATCATCTTCATCTTCTGAGAGCCAGATGTGGGGTTTTCCTCATCCTCAGAGCGGGTTCATGCCTCGGTTGAACCCTCACACTCTTGAATTCCAAGGCGCACGTGCTGGGTCACTACAACTGGGGTCCATGCTGATGGCGCAGCAACCCTCTCAGCATCTTGGTCTGGCCATGTCCGACTCCAACTTGGGCATGTTGGCCGCTCTTAATGCTTACACTAGGGCTGGTTTCAATATTAATTCCCATCAACCCACCCAGAGTGGAGAAGATGCTCCCAATACCTCCCAATGA 1230 0.5691 MEVSDLQKKKKQTVTVTVGGGGVGGGGGGGSSNHPVVHQQGSSSHVVVPSNSSSSSSSAIDASLAIATRSDESAQQLSTTTVAPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLHQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFALAHHPYDEPFQHPALLGFHHHHQHQHQHQHHHQQQQQLLSADQIAEALPSESGESYLRKRYREDLFKDDNISRQSQNESGEGSSPKAPNIELPKQQNEGVVRVPTAMWAGGPPGSTIWMLPVTPGSSSSSSSSSSSSSSESQMWGFPHPQSGFMPRLNPHTLEFQGARAGSLQLGSMLMAQQPSQHLGLAMSDSNLGMLAALNAYTRAGFNINSHQPTQSGEDAPNTSQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01524 409 MobiDBLite consensus disorder prediction 1 101 - -
Pste2g01524 409 Pfam TCP family transcription factor 88 243 IPR017887 -
Pste2g01524 409 MobiDBLite consensus disorder prediction 200 219 - -
Pste2g01524 409 MobiDBLite consensus disorder prediction 247 276 - -
Pste2g01524 409 ProSiteProfiles TCP domain profile. 89 143 IPR017887 -
Pste2g01524 409 MobiDBLite consensus disorder prediction 33 85 - -
Pste2g01524 409 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 379 IPR005333 GO:0003700
Pste2g01524 409 MobiDBLite consensus disorder prediction 86 101 - -
Pste2g01524 409 MobiDBLite consensus disorder prediction 294 338 - -
Pste2g01524 409 MobiDBLite consensus disorder prediction 300 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01524 Pste-Chr2 16348704 16349933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01524 86 375 TCP Transcription Factor Family AT1G35560 47.682 3.31e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste2g01524 TCP 2.5e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01524 2 16348704 16349933 Pste2g01524 2 16348704 16349933 ECH