Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01480 ATGGGTTGTATATGCTCCAAAGTAAAATCCGGCGTTGCTCAGAACCATGATGCCAAACCCAACACCAAGAAGCACAAGCATATGGAATTAACATCAGACAATGATGCAATGGCTAACCTCGTATCAAATGCAAATGCAGCCTCGACCACGGTTTCCTCAGATGGGATTGGGGACAAGAATGCAATGGCACAGCAACAGCAACAGCAACCTCAGCAACAACCTGAACCTGAATCCAAGGTTTGCAGCAGGATATTGAGTGTAACTGGAGGGGAAAAGGGAGCACAGGTTCTTGCTGGCTGGCCCTCTTGGCTCACTGCCGTTGCTGGAGAGGCCATTAGTGGAACTTACAGCAGTGTCTATCGAGCTCGTGATCTCGAAACAAATAAAATTGTTGCTTTGAAGAAGGTTCGATTTGCCAATATGGATCCTGAAAGTGTTCGTTTCATGTCCCGAGAAATTATTGTGCTCCGAAGACTTGATCATCTCAATGTCATGAAGCTTGAAGGCATGATTACTTCCAGGGTTTCTGGTAGCTTGTACCTTATTTTTGAATATATGGACCATGATCTTGCTGGCCTTGCAGCAATACCCGACATCAAGTTTACTGATGCACAGATCAAGTGTTACATGCAACAGCTTCTTCGTGGTCTTGAGCATTGTCACACTCGTGGTGTTATGCACCGTGATATCAAGTGCTCAAATCTTCTGGTTGACAGTAATGGCAATCTGAAGATTGGTGATTTTGGGCTTGCAACTTTGTTTCAGCCATCTCAGGGACAGCCTTTAACAAGTCGTGTAATAACCTTGTGGTACCGGCCACCTGAACTTTTACTTGGAGCTACAGATTATGGAGTTTCTGTGGATTTGTGGAGCGCTGGATGTATTCTTGCAGAGTTGTTTGTTGGGAAGCCTATAATGCCTGGACGAACAGAGGTGGAGCAACTACATAAAATCTTCAAACTTTGTGGATCTCCATCTGAAGAATACTGGAAGAAATCAAAGCTACCGCATGCAACAGTTTTTAAACCTCTACAACCTTACAAACGTGTTGTTTCTCAGACTTTCAAGGATATTCCTTCATCTGCAATGAGCCTCTTGGAGGTCCTTCTTTCTGTAGAACCGAAAGATCGAGGAACTGCATCTTCAGCACTTCAGCATGAGTTCTTCACAGCAATGCCACTTCCTTGTGATCCGTCAACTTTGCCAAAGTACCCACCAAGTAAGGAGTTTGATGCCAAACTTCGTGAAGAGGAAGCTAGAAGACGAAGAGCTGCAAATAAAGGACATGAACATGAATCAGTAGGGAGAAATTTTAGAGAGTCTAAAGCTGTGCCAATACCTGATGCTCATGCTGAGTTTCAGGCATCTGTGGGGAGACAAGGACAATGTAATTCTAAGTGCAACACTGAGAAGTACAATCCTGAAGAGGGTGGTGGTGATGGCTTCCCTCGTGAACCTGCAAAGTCGAGAGCAGTCAATGTATTATCTCATTCTGGCCAGTCAATGCATCCTAGCGTATATGGATCTTCACTCAATATGAAATTGAAAGAGGAAGATGTTCTCACTTGCCAAGATAATGACTTCAGATCAAGAAAGTCTGGGTTGAGAAAACAAAAATCCTATTGGCACAGTAGAAGAGCAAAATTGTCAAGATTTTCTAATTCAGTTGCAGTGCGAGGTGATTCACTGCTTGATATGAGTGGAGAATCTGGCGTGAATTCTCAGTGGCTAGAAGATCAATTTGGTGTGAGAGACAGCAATCTGGCTGATGGTGAGTCCAACCAATTGTTGGATGGACATAAATCTTCACAGAAGGACTTTCATCCTATAGGGAAGGATCGTGTCAAGGGCTATGCTAACAAAAATGGTCGCATGCATTCTGGACCCCTGTTTGCTCCAGAAGATAATCTTGAAGAAATGCTTAAGGAACATGAAAGGCAAATCCAAGAAGCTGTCCGCAAAACTCGTTTGGGTAAGGACAGGACAAAAAAGGCTGACAGCGAGAATGACCTCACTGCATCACTGTTTCCTCATTTGAGAAATAAAAAATGACTTTCAAGAAGTCTTTTATGCATCCCATATTGGACAAGAACACTTCAATAGAAGATCTTCTTGATCAAAATACCAAGATTTACCAAACTCTTGATGACGAAAGATGACCGATGCTAGTAGGGAACATCACATACTTCTTCACATCAGATATTTATAATTACCATAGAAGGTCTTGTACAGGTTTCAGCCGAATAGTTTATAGAGAAAATGAAATTCATGGCAATTGACTTTATACCAG 2290 0.4271 MGCICSKVKSGVAQNHDAKPNTKKHKHMELTSDNDAMANLVSNANAASTTVSSDGIGDKNAMAQQQQQQPQQQPEPESKVCSRILSVTGGEKGAQVLAGWPSWLTAVAGEAISGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMSREIIVLRRLDHLNVMKLEGMITSRVSGSLYLIFEYMDHDLAGLAAIPDIKFTDAQIKCYMQQLLRGLEHCHTRGVMHRDIKCSNLLVDSNGNLKIGDFGLATLFQPSQGQPLTSRVITLWYRPPELLLGATDYGVSVDLWSAGCILAELFVGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATVFKPLQPYKRVVSQTFKDIPSSAMSLLEVLLSVEPKDRGTASSALQHEFFTAMPLPCDPSTLPKYPPSKEFDAKLREEEARRRRAANKGHEHESVGRNFRESKAVPIPDAHAEFQASVGRQGQCNSKCNTEKYNPEEGGGDGFPREPAKSRAVNVLSHSGQSMHPSVYGSSLNMKLKEEDVLTCQDNDFRSRKSGLRKQKSYWHSRRAKLSRFSNSVAVRGDSLLDMSGESGVNSQWLEDQFGVRDSNLADGESNQLLDGHKSSQKDFHPIGKDRVKGYANKNGRMHSGPLFAPEDNLEEMLKEHERQIQEAVRKTRLGKDRTKKADSENDLTASLFPHLRNKK 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01480 683 ProSiteProfiles Protein kinase domain profile. 105 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01480 683 PANTHER CELL DIVISION PROTEIN KINASE 113 395 - -
Pste2g01480 683 Coils Coil 407 427 - -
Pste2g01480 683 SMART serkin_6 113 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01480 683 Gene3D Transferase(Phosphotransferase) domain 1 188 429 - -
Pste2g01480 683 MobiDBLite consensus disorder prediction 47 78 - -
Pste2g01480 683 SUPERFAMILY Protein kinase-like (PK-like) 113 397 IPR011009 -
Pste2g01480 683 MobiDBLite consensus disorder prediction 417 436 - -
Pste2g01480 683 Pfam Protein kinase domain 113 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01480 683 CDD STKc_CDK9_like 113 389 - -
Pste2g01480 683 FunFam probable serine/threonine-protein kinase At1g54610 106 187 - -
Pste2g01480 683 FunFam probable serine/threonine-protein kinase At1g54610 188 429 - -
Pste2g01480 683 MobiDBLite consensus disorder prediction 587 615 - -
Pste2g01480 683 MobiDBLite consensus disorder prediction 599 615 - -
Pste2g01480 683 Gene3D Phosphorylase Kinase; domain 1 107 187 - -
Pste2g01480 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Pste2g01480 683 MobiDBLite consensus disorder prediction 644 668 - -
Pste2g01480 683 MobiDBLite consensus disorder prediction 644 683 - -
Pste2g01480 683 Coils Coil 634 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01480 Pste-Chr2 16110618 16115580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01480 114 427 Core Cell Cycle Gene Families AT5G10270 49.544 1.84e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste2g01480 Pkinase 6.7e-65 CL0016