Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01459 GGAAGCAGCGAAGGAATAATTCTGTGCTTGGAGAAAGGAAAAAAAAAAGAAACAAATATTGGAAGGGCAGAAAACCGCAGAGCACGTCACAAGTCAGAAGGACGTAAAAAAAAGGCGAAGAAATTGAGGTTACTTAATCATCTGTGTCTTTCTCCTTGTGAAGAAACAAAGGCTCCGTCCAACCTTATTTATATCGAAACTGAGCTCCTCTCCCCAAGCAATGAATCATATGAGAGTGAGACTAGTAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCGTGGGATCGAGAAAAGGATGCTTGTCTCGGGAGTGTACTCATGGGATCTGAAATGGGTCGTGTTCTCCGCGTTGGTATTTGCGATTGGGTTGCACGCGTTGCTCAAGAACACCGCCTCCAAGTACTTGGACGTTGACGCCACTTTCCCCGCCATGCCCGCCACCAATACCTGTTCTCTTTGCAAATCCGTTCCATACTGGTTCTCCCACTGGAAATCCCACCATCAGATGAGATGCAAGGACTTTCATTTGCCTCAAACTATTCCACCCTCCAAAGCTTCTGCTGCTCTCAATTCTACCACTACCTCTTCATACTTGTTGGAGAAGGGCCACCGCAGACAATGCTGTCATAATGATTGGTGCTTTCTATGCGAATTTGAGACCCATGTTGAAAAGGCAAGGCATAGTTCTCAGGCGTTTTCTCCGATGACTATTCTCTCTCGTTTGCCTAATATTGGTGGTACACTGGGTTATGGAAAACAAGAGGATGCTCACGAGTTCATGAGGTTTGCCATTGATGCTATGCAATCTGTTTGCCTTGATGAATTTGGTGGAGAAAAAGCTGTCCCTCCTATGCATCAAGAAACAACCCTTATCCAACACATTTTTGGTGGTCACCTTCAATCTGAGGTGATTTGCACTGAATGTGAGAAGAATTCAAATCAATATGAAAATATGATGGACTTGACAGTTGAAATTCATGGAGATGCTGCATCATTGGAGGAATGTCTAGACCAGTTTACTGCCAAGGAGTGGCTTCACGGGGATAATATGTATAAATGTGATGGGTGCAAGGGTTATGTCAAGGCATGGAAACGTCTCACAGTGAAACGAGCCCCAAATATTCTTACAATTGCCTTGAAAAGATTTCAGAGCGGGAGGTTTGGAAAACTTAACAAGAGAGTAACTTTTCCTGAGACTTTAGATCTTAGCCCTTACATGAGTGAAGATGTAGACGGATCTGATATTTATAAGCTGTACGGTGTTGTAGTACATATTGATATGCTGAATGCTTCATTTTTTGGCCATTACATCTGCTACATCAAGGATTTCCATGGAAACTGGTATAGAATTGATGATTGGAAGGTCATGAGTGTGGAATTGGACGAGGTGCTTTCTCAGGGTGCATACATGCTGTTGTATAGCAGGGTTAATGCTCGACCATCGGGACTTCAAAGTATCGAACCATCAGAGACAGCAGAAGTGCAAGCAGTCACATCAGAGGTGCAGCCTGCCCCAACTGAACAAGCCGAATGTGTCTTGGATATGAAAACCGAGACTTGCAGTAGAGAATGTGAGCCTTTGCCATCTGACAGTAGTCCAGAGTTGAAGGTTTGCAGCTGTGAAAACCTGTCTTTGACTGGAATAAATACTGGAGTTAAAGGAGAGCATTTTAAGGATGTGGACATTATTGATTTTGCAAATGAGTCTTCCTGCAATCATGTTGAATCATCTCATCTGCATGATTCTGAATCTGTCAAAGATTCAGCAGATATAGATTCGGATGGATCAAATGCATGTTCATCTGTTGTAGAAGAGATTTCAGTCTTCATGGAAGAGCAAGGTGATAGTGATATGACTAAGTCAACACCTTCTCCATGTTTGCCTAATGGCTTTTCTGGCTTTGATAAGGATTCTTCCGTTTCAATTGATTATCAAAATACAAGGGAAGATTCAGATAATGTAGATGTGATTAAATGCAAGGTAACAGCAAATGGCTTTGCAAATTATAGCATTGGGTATGCCAGTCAAAACAAATATGATGATGTCCCAGTGGAAGATGGTGACGGTTCTTTTTCCACGGAAACACCCTCAGCTCAAATGCATCAATTGAAGTGGAAATTGGCTTCTGAGAATTCTGAAGCTGACCAAGGAAATGGAGTTAAGAAAGTGGAAATATCAGGGAATAAGTTAATAATTTAGGAGCAGCTGTTTTTGTCATTTGTTCATATCAATTTCATTATATCCCATCATCGGAAAGAGGTGAGTAGGGAAATTTTTGTCTGGGGTTTCATTATTTGTTGGAACCTTGGATCTTACTGTAATATTTCCTCGTGGGTTCTCTAATTTTATCATAGTGAGAATGTAACTCCATACTCCTGATTTCTCTCTACACATAGTACCTATAGGAAGCAAAATATTTCAAACGTGTCTCTTAACCTTTCTATACAATTTGTGCCACCGATCTAATTCTGTAACACGTGCCCTCACATATGGAAATTGGTAATAGTAGTAAAAACACATTAGCTGTTAATTTTACAGTGAGTTGTGTTTCTT 2553 0.4113 GSSEGIILCLEKGKKKETNIGRAENRRARHKSEGRKKKAKKLRLLNHLCLSPCEETKAPSNLIYIETELLSPSNESYESETSKKKKKKKKKKRGIEKRMLVSGVYSWDLKWVVFSALVFAIGLHALLKNTASKYLDVDATFPAMPATNTCSLCKSVPYWFSHWKSHHQMRCKDFHLPQTIPPSKASAALNSTTTSSYLLEKGHRRQCCHNDWCFLCEFETHVEKARHSSQAFSPMTILSRLPNIGGTLGYGKQEDAHEFMRFAIDAMQSVCLDEFGGEKAVPPMHQETTLIQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTAKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSEDVDGSDIYKLYGVVVHIDMLNASFFGHYICYIKDFHGNWYRIDDWKVMSVELDEVLSQGAYMLLYSRVNARPSGLQSIEPSETAEVQAVTSEVQPAPTEQAECVLDMKTETCSRECEPLPSDSSPELKVCSCENLSLTGINTGVKGEHFKDVDIIDFANESSCNHVESSHLHDSESVKDSADIDSDGSNACSSVVEEISVFMEEQGDSDMTKSTPSPCLPNGFSGFDKDSSVSIDYQNTREDSDNVDVIKCKVTANGFANYSIGYASQNKYDDVPVEDGDGSFSTETPSAQMHQLKWKLASENSEADQGNGVKKVEISGNKLII 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01459 732 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 103 478 - -
Pste2g01459 732 MobiDBLite consensus disorder prediction 19 39 - -
Pste2g01459 732 CDD Peptidase_C19E 197 474 - -
Pste2g01459 732 FunFam Ubiquitin carboxyl-terminal hydrolase 15 187 484 - -
Pste2g01459 732 SUPERFAMILY Cysteine proteinases 197 486 IPR038765 -
Pste2g01459 732 MobiDBLite consensus disorder prediction 576 590 - -
Pste2g01459 732 MobiDBLite consensus disorder prediction 576 596 - -
Pste2g01459 732 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 178 476 IPR028889 -
Pste2g01459 732 Pfam Ubiquitin carboxyl-terminal hydrolase 197 473 IPR001394 GO:0004843|GO:0016579
Pste2g01459 732 Gene3D Cysteine proteinases 186 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01459 Pste-Chr2 15887803 15892912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01459 196 500 Miscellaneous Gene Families AT2G24640 72.787 7.18e-168 490