Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01449 CTCAAGAGTGCCCACACCAGCCAACATAGAAAACAACACACACAAAACAGGAAGTTCATATATTATAGTCTACACAACCAAAATTATAATCTCCCCCTCAGATGGAGAATATTGGAGAAGAATACAAGCATTATTGGGAGACCAACATGTTCCTCCAAACCCAAGAGCTTGACAGTTGGGGGTTGGATGTGGACTTATCTGGGTACTACGATTCGAGTTCCCCAGATGGTGCTGCTTCATCTGCAGCATCCAAGAACATTGTTTCAGAGAGGAATCGGAGGAAGAAGCTCAATGAAAGGCTTTTTGCTCTTAGATCGGTGGTCCCTAACATTAGCAAGATGGATAAGGCTTCGATTATTAAGGATGCTATTGAGTACATCCAGCTCTTGCACGAGCAAGAGAAGATTATTCAATCTGAGATAATGGAACTTGAATCTGGGATGCCAAAAAAGAGTCCAAGCTATGATTTTGAGCAGGAACAGCTTCCTGTGGTGCTGAGGTCCAAGAAGAAGAGAACAGAGCAGATATACGATTCTGTTAGTTCAAGAAACTCCCCAATTGAAGTCCTTGAGCTGCGGGTTACATACATGGGGGAGAAAACTGTTGTGGTGAGTTTGACATGCAGCAAAAGGACAGACACAATGGTGAAACTGTGTGAAGTGTTCGAATCTTTGAAGCTCAAGATCATCACTGCTAACATCACTTCGTTTTCAGGGAGGCTTTTGAAGACAGTCTTCATTGAGGTTGGTCTTTCTTAACTTTGACATCACCTTTCTATTTATCATATTATATAGTAATAACAATAATTTCTCTCTTTTTAGTACTCTTTACTTTATTTATTCCCATTGAATAAGCTTTGGTGAATTGGTAGGTATAGAGATCTGGATTCTATTTTTTTTTTAAACTTAGAATAATAAATGAGTACAAATGGCACAAAGTAACCAAGTTACAGCTAGAATTAGGGCCTACAGGCTTGGAAACTACAAGACCACTTTAGCTAAAGTGGAAGTGTGGAACACCCATTACAAGTATTGCTAGACTTTTGAGGGCAATCATGAGGGCTTTAACCAGAATTTCCAGGTGAAGTCAGGTCAAGGGTTGTAATTTTCATCTTGTTAAAAGTCATAATAAAAATACATTATATGAATTTCTAGGTATAAAAATTATGAAGTTGACATGAGAGAGCTGAGAAAAGGAAAAAACTAACATTATTAATAAAATTAACATCTAAGAAAAAATTATGAAGTTGACATGAGAGCTGAGAAAAGGAAAAAACTAACATTATTAATAAAATTAACATCTATAAGAAAAAATTATGAAGTTGAAATGATAGCTGAGAAAAGGAAAAACTAACATTATTAATAAA 1366 0.3653 MENIGEEYKHYWETNMFLQTQELDSWGLDVDLSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQLLHEQEKIIQSEIMELESGMPKKSPSYDFEQEQLPVVLRSKKKRTEQIYDSVSSRNSPIEVLELRVTYMGEKTVVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGRLLKTVFIEVGLS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01449 218 SMART finulus 53 102 IPR011598 GO:0046983
Pste2g01449 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Pste2g01449 218 Pfam Helix-loop-helix DNA-binding domain 54 96 IPR011598 GO:0046983
Pste2g01449 218 Gene3D - 43 113 IPR036638 GO:0046983
Pste2g01449 218 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 114 - -
Pste2g01449 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 113 IPR036638 GO:0046983
Pste2g01449 218 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01449 Pste-Chr2 15773183 15774966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01449 1 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 64.126 9.35e-87 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste2g01449 HLH 2.5e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01449 2 15773183 15774966 Pste2g01449 2 15773183 15774966 ECH
Pste6g03774 6 26887230 26893146 Pste2g01449 2 15773183 15774966 PCT