Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01447 ATGGACATGGACATGGACATGGACATGGAGGAGAATCATGCCATGGCTGCAACCGCTACTTGTAACAGCAGTGATCACATCCCAGTATCTTCTTCTTCTTCTGTTAATGATAATAACAACAAATTATACAAAGGGGTGAGAAAGAGAAAGTGGGGGAAATGGGTTTCTGAAATCAGACTTCCCAATAGCCGAGAGCGCATATGGCTAGGGTCTTATGACTCTGCTGAAAAGGCAGCACGAGCCTTCGATGCTGCCCTTTACTGTCTACGTGGTCGCCATGCCAATTTCAACTTCCCCAACACTCCTTCTAACGTGGACGCCAATGTGGATGTGCCTGTGCCTGCGCCTGCTCACCAATCCCTAACCCCACAAGAGATTCAAGAGGTTGCTGCTAAGTTTGCACACATTGACCCACTGCTACTAAAACCTCTTGATGCTCAACAAACACAACATGCTCCCCCTCATCATTCTTCATCATTTGGATCCAACTTATGTAAATCAGACATTATAGCGGATAGCAGCAACAGTACTACTACTTGTACCCCCACCACCACTGCCTCCTCATCTTCTCATACTATGTTTGAATGTGATGGATCGGTGCAACTGGACCATGGGGACATGGATTGGACATTCTTGAACATGTTTGATTACTCCAACGAGGTCTTTCCTGTTGGATCCGACTATGATCTCCACTCTCACCTACACAAGATGCACTCAAGTATTTCAGGTGAGTTGTTGTATTCCACTCTACCCCCTTTTCAGGGTTGCGAGGAATCAATTGAAGTTGATGACGATCCTTTTTCTCACCCATCATTCCTTTGGGATTGGAATTTTTGA 837 0.4564 MDMDMDMDMEENHAMAATATCNSSDHIPVSSSSSVNDNNNKLYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALYCLRGRHANFNFPNTPSNVDANVDVPVPAPAHQSLTPQEIQEVAAKFAHIDPLLLKPLDAQQTQHAPPHHSSSFGSNLCKSDIIADSSNSTTTCTPTTTASSSSHTMFECDGSVQLDHGDMDWTFLNMFDYSNEVFPVGSDYDLHSHLHKMHSSISGELLYSTLPPFQGCEESIEVDDDPFSHPSFLWDWNF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01447 278 SUPERFAMILY DNA-binding domain 42 99 IPR016177 GO:0003677
Pste2g01447 278 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Pste2g01447 278 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Pste2g01447 278 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Pste2g01447 278 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Pste2g01447 278 Pfam AP2 domain 43 91 IPR001471 GO:0003700|GO:0006355
Pste2g01447 278 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Pste2g01447 278 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Pste2g01447 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 30 186 - -
Pste2g01447 278 FunFam Ethylene-responsive transcription factor 2 41 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01447 Pste-Chr2 15726397 15727233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01447 43 135 AP2-EREBP Transcription Factor Family AT1G74930 68.817 7.52e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g01447 AP2 1.4e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01447 2 15726397 15727233 Pste2g01447 2 15726397 15727233 ECH