Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01436 CTCACTCTCTCTCCTTTTGGGTTAAGTTAAGGTGAGACTTGAGAGGGCTGTGGTGTGATTCCCATTACTCTTCTCACTACTACTTTGACCCGCTTTTTATTCCATCCCTCTCTCTCTCTCTCTCGTCCCACTACTTCCATCAGAGACATCACATGCATTTGCAATTTTCAAAAGCAAGCATTTTTTGTTTTTTTAAAAAGCACCATAACAAGTAGAAACTATAATGGTATAGGTGCACTCTGTGCACTCTTTCTTTCGCCTACTCACGCAGAAAAAGAAGATTGAAAACTCTGACTGTGACTCCTCGTCAGTCAGAGCAGAGCAGAGCACCATATTCAAAAAAATTCCCTTTTCTTTTATTGTCCTTCCTCTCCGCACTGCAAAACAAAAACATACACATCTTCTAAATCCATTCTCTGTCTCCAACTCCACAACAACCCCTTTACTCAAGATTCCGTTTTTTACCTCACAGCCTTTTCAACTTGTTGAAAATTTCAGTTTTGGAATCGTTTCACCATTTCACGTGATCTGGGTTTGTTTCATATAAAGTTCAGCTCTTCACTGATCCAACACTTTTTTTTTTTTTAACCTTTTTAATTCACCCATTCAGAGCTGCTATTGTCCTGATTGAATTTCCCTCATGAATTTCAATTCATAGATATGCCTTGTGGGTTTTCAATTGCTGAGTGATGAATAGACAGATGCTTTTGTTTTAAAAATTTTGTATGATAAAATCTTGTGGCTGTTATGGGTGGTGATGGTAGAGTTGAAGTTGTGAGTGGCAAGGGGTGTTCAAGGCTGTTTTCATCGTCAATTCCTTCATTCAGAGGTTTGCAACCATTGGAGCCAATGTCTCCTGTTTCGTCCTCTCAGCAAGTGCCACCATCAGTTGCTCCTTTTGCTGGTCTTGTCATATGCGTCACTGGTTTATCTAAAGAAGCAAGGAATCAGGTCATGGAAGCTACAGAGAGATTAGGGGGCCAGTATAGCCCCAATTTGCATCCTCAATGTACCCATTTGTACAGTTTTGGTGGACGCAAGTTTGAGCATGCATTGAAGCATGGAGCAAAAAATGGCCTCTTTGTTGTTACATTGGGTTGGTTTGTGGATAGTGTGAGGAAAAATGTGAGGTTGAGTGAATCACATTATAGAGTGAAGAGTTACGGGGATAACATGCGCTTGGAGGATTTTAGACTGCAACCTGAGTATACAAATGCTGAAAATTCTTGTATTCCTGCAACAATCCACCAAACCAAGCAAGCTAATAGTGTTGAAGAACTACAAAGATTCTCTGGGAGAGAGCCTATCAGAAAAACAGACTCAACTTTGTCTGGCTGCTCCATGTATGTTGATCCAGGAATTTCATCTGAATTGCGAAACAAGGTTATCGAGACTGCTTCAAGAGAAGGAGCTAATTTGGTGGAACAATGGTTTGTCGGCTGCAATGTTAGTCATGTAGTAACTGAAGGGACATCTATCCAAAGATATCTTGGATACTCTAGTAACCTCATTACACCTCTGTGGATTCTCAAAACAGCTAAGGAGAAATATGTGAGAAGGCTTGTTCACATGTCTGTTGATTTGGCAAAGCAAATTGGCCTGATGCTTGAAGACGTTCATAATGGCATTTCAGGAAAGGAATTAATGAAGCAAAAAATCCTTGACAATCTTCCGGATAGTGAAAGTGAAGTTGGCTATGAAGAAAGGCAACAAATTGTGAATTCTGCAAAAAATGGAGTCAGAAATCGCCGTGGTCGTCGAATGCAGACTTGTCAGACTCCAATACGTCCTATAACACCCAACAACATGCTAGACTCTATCTGCTGGTCTATATCCGAGTCAACTTCAACTGCTTCCATTTACACAGACTCTTTCAGTGTTGAAGATCCTAGTGAAAATCATACTTCAATATTTTTTGACGCAAAAGGAGATGGCAAGGATTCAGAAGCTTCATTTTCAAACTCCACTCGTCCTCTGACAGAAAGTGAAAAATCTGAGTTGATATTTAAAAACCATTTCCTTACCATACTCTTCCCAATTGACCGATTTGCTGAGATGGGCCCTTCATCGAGAACATTTTTCAGCCATAATGGTTTTACGTGTCTTCAGGTGTTGGATCATATCCATGCATTTTATCAGGAGAACATGTCAAGACAGGAAATAGAAGCTGCAATTCATAGTGATTCAAGACATGCTGACAGACTTCGATCAGTGTACTCTAGTATGGAAACAGCAGAACGTGGCTATGTAATGTTCAAACGAGTTGAATTCTTGGGTAGTCGTACCAGTTTTGAAATGTTAAAACGTGTATCTGGGGACAACAACTCCAACGGCAAAATGTTGTCTGGTAAGAAGTTCGAAACTCGTGACATCATTATCAACAACAACACACCTGGTCTTCAATATTTGGGTAACAATATCCTATATGATTCAATGTTT 2439 0.4002 MGGDGRVEVVSGKGCSRLFSSSIPSFRGLQPLEPMSPVSSSQQVPPSVAPFAGLVICVTGLSKEARNQVMEATERLGGQYSPNLHPQCTHLYSFGGRKFEHALKHGAKNGLFVVTLGWFVDSVRKNVRLSESHYRVKSYGDNMRLEDFRLQPEYTNAENSCIPATIHQTKQANSVEELQRFSGREPIRKTDSTLSGCSMYVDPGISSELRNKVIETASREGANLVEQWFVGCNVSHVVTEGTSIQRYLGYSSNLITPLWILKTAKEKYVRRLVHMSVDLAKQIGLMLEDVHNGISGKELMKQKILDNLPDSESEVGYEERQQIVNSAKNGVRNRRGRRMQTCQTPIRPITPNNMLDSICWSISESTSTASIYTDSFSVEDPSENHTSIFFDAKGDGKDSEASFSNSTRPLTESEKSELIFKNHFLTILFPIDRFAEMGPSSRTFFSHNGFTCLQVLDHIHAFYQENMSRQEIEAAIHSDSRHADRLRSVYSSMETAERGYVMFKRVEFLGSRTSFEMLKRVSGDNNSNGKMLSGKKFETRDIIINNNTPGLQYLGNNILYDSMF 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01436 564 SMART BRCT_7 191 267 IPR001357 -
Pste2g01436 564 SMART BRCT_7 48 126 IPR001357 -
Pste2g01436 564 CDD BRCT_TopBP1_rpt2_like 50 126 - -
Pste2g01436 564 ProSiteProfiles BRCT domain profile. 189 267 IPR001357 -
Pste2g01436 564 ProSiteProfiles BRCT domain profile. 46 136 IPR001357 -
Pste2g01436 564 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 528 - -
Pste2g01436 564 Gene3D BRCT domain 49 138 IPR036420 -
Pste2g01436 564 Pfam Family of unknown function (DUF6699) 429 520 IPR046522 -
Pste2g01436 564 Pfam twin BRCT domain 54 118 IPR001357 -
Pste2g01436 564 SUPERFAMILY BRCT domain 42 137 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01436 43 136 Core DNA Replication Machinery Family AT1G77320 37.500 4.54e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01436 2 15632132 15638074 Pste2g01436 2 15632132 15638074 ECH