Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01431 AAATCATTTACCAAACGAGACCTTAATTTCTTGACAATAATTTTTCCATGAGTGCCCATGTGATAGTATGTTTATACAAATAAAAGAAGGTATTTTTATTTTTATTTTTATTTTTATTTTTGTTTCTGTAGAGATATACTGTTGAAGATCGGACAGAGTTGGATAAATGTATCCCATCGGCTAAAGAGAGTTGTAGATATTATAACCAAGCACGATTTTCTGCTTTGAGTTTAAAGCCAAAGATTGAAGCCTTGTGGTCCAAGTTTGATGCGTTGTTATCAGAAAATCAAAGTAACTATAAGGATGTGGTCGATAAATTTAAGACGCTGTCTCAGCGGATGTCCAATGAAATTGCAAAATCTTACATTGCCTTGAAGATCTCGGCATCCTATGTGCTTATGAGAAAAGGTTATCTTCAGTGTATAACTTTTGTTGAAGAAGTTGTCAAATTAATTGAAGAATCCCTCCATCTTGCTGATAAAAAGATTTTGGAGGTTGATCTTGATTATTCACAGGCAGAAGATTTGGGATACATATCTCCTAAATTAATTGAACTTATTAAAATCTTCCAGTCATTTGGAAAATCTAGTCAGGTGTTATGCCTTATTTTTGTTGATAGAATCATTACAGCCAAGGTGATTGAAAGATTCGCAAAGAAAGTTCCCCATATTTCACATTTCACAGTTTCCTATTTAACCGGAAACAATACATGTGTTGATGCTCTGGCTCCTAACAGGCAGAAGGAGATATTGGATTCTTTCCGCACTGGAAAGGTCAATCTGTTATTTACTACTGATGTACTTGAGGAAGGAATTCATGTGCCTAACTGCTCTTGTGTGATACGTTTTGACCTACCAAAGACAGTTCGTAGCTATGTCCAATCTCGTGGAAGATCTAGGCAGGCAAACTCTCAATTTATTGTGATGGGAAACTTGAAGCAAAGAAATCAACTTTTTGGCATCATTAGGAGTGAGCGCTCCATGACTGATGCATCTATATATAAAGACCACGAATCTAGTTTAAGGTCATTTACCATGGGGAAAACAATTGCATACTATGTGGAATCTACTGGAGCGTCTGTCACTTTAGAATCTAGTGTTAGTCTTATACACCGATACTGTGGAACACTACCACAAGATAGGTTCTGCAATGCAAAGCCCAGTTTTGAGTTTCTGCCTGTGGATGGGGTTACCACTTTCCAAACAATCATTGGTCCTTTTGGAAAAGATATTTGTTTGGCAAAGCTTCTTGCATGTTTCGAGGCTTGTAAGAAGCTGCATCAAATGGGTGCCTTAAATGAACATTTGGTTCCATTTATTGATGATTCTTCAGAGGATGACCGTATTGTGAAAATAAAGAATCAAGTTCTGGTGCAGGTATAA 1382 0.3654 MSNEIAKSYIALKISASYVLMRKGYLQCITFVEEVVKLIEESLHLADKKILEVDLDYSQAEDLGYISPKLIELIKIFQSFGKSSQVLCLIFVDRIITAKVIERFAKKVPHISHFTVSYLTGNNTCVDALAPNRQKEILDSFRTGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQFIVMGNLKQRNQLFGIIRSERSMTDASIYKDHESSLRSFTMGKTIAYYVESTGASVTLESSVSLIHRYCGTLPQDRFCNAKPSFEFLPVDGVTTFQTIIGPFGKDICLAKLLACFEACKKLHQMGALNEHLVPFIDDSSEDDRIVKIKNQVLVQV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01431 347 Gene3D Dicer dimerisation domain 248 336 IPR038248 -
Pste2g01431 347 PANTHER DICER-RELATED 37 334 - -
Pste2g01431 347 Pfam Dicer dimerisation domain 253 327 - -
Pste2g01431 347 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 69 229 IPR001650 -
Pste2g01431 347 FunFam Endoribonuclease dicer-like 1 60 220 - -
Pste2g01431 347 Pfam Helicase conserved C-terminal domain 82 186 IPR001650 -
Pste2g01431 347 SMART helicmild6 102 189 IPR001650 -
Pste2g01431 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 190 IPR027417 -
Pste2g01431 347 CDD SF2_C_dicer 65 196 - -
Pste2g01431 347 Gene3D - 60 222 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01431 Pste-Chr2 15588289 15596385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01431 87 186 Eukaryotic Initiation Factors Gene Family AT3G19760 34.259 4.92e-08 52.4