Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01411 TGGACATGTTAGACGTTGTTCACAGAACCAGGATGGAGGAGCAGATGGCAATACAAGAAGCTGCTTCTGCTGGCTTGAAGAGCATGGAGCATCTCATTCGACTCCTCTCTTCCTCTTCTTGTGACAACTCTTCTTCTCCTCCTCTTAACAACGTTAATCTCAACAACCTCGACTGCTCCCAAATCACCGACTTCACCGTCTCCAAGTTCAAACAGGTCATCAATCTTCTCAATCGCACCGGCCACGCCCGCTTCCGTCGCGCTCCGCCCCAGGCCCAGGCCCACGCCCAAGACCAAGCCCACCCACAACCTCAAACCCACCAACAAGGCTTGTCTTTAGATTTCGTTAAACCCACCATTCTAAACACCAAGCTCAGCAACAAAGACGAAACCCTCACTCTCTCCACCACCTCCTCTTCCTTCTTATCTTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGGCCTTTCCTCCCTCCCTCCGCCGCCAAACCCCTCTCTCCACCTCTCACCTGTCACGACCCGGCGCTCTCCGCCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCTCGTGTGAAACGAACTATCCGCGTCCCGGCGATAAGCTCAAAGATCGCCGATATCCCACCGGACGAGTACTCCTGGAGAAAATACGGTCAAAAACCGATCAAGGGCTCCCCTTATCCTCGTGGGTACTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCGAGGAAGCATGTGGAGCGCGCGCAAGATGACCCGAAGATGCTGATAGTGACATACGAGGGCGAGCACCGGCACGCGCTGCCGCTGACTCCCGCTCCAGGCGTTGGTTTTGGACACTAA 854 0.5562 MLDVVHRTRMEEQMAIQEAASAGLKSMEHLIRLLSSSSCDNSSSPPLNNVNLNNLDCSQITDFTVSKFKQVINLLNRTGHARFRRAPPQAQAHAQDQAHPQPQTHQQGLSLDFVKPTILNTKLSNKDETLTLSTTSSSFLSSVTNDASVSDGKIGPFLPPSAAKPLSPPLTCHDPALSAKPSCHCSKKRKSRVKRTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALPLTPAPGVGFGH 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01411 282 FunFam WRKY transcription factor 65 194 271 - -
Pste2g01411 282 SUPERFAMILY WRKY DNA-binding domain 208 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g01411 282 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01411 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 270 IPR044810 GO:0003700
Pste2g01411 282 Pfam WRKY DNA -binding domain 212 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01411 282 Pfam Plant zinc cluster domain 178 208 IPR018872 -
Pste2g01411 282 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g01411 282 Gene3D WRKY domain 194 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g01411 282 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01411 Pste-Chr2 15379342 15380590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01411 2 268 WRKY Transcription Factor Family AT2G24570 51.258 1.37e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g01411 WRKY 2.8e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01411 2 15379342 15380590 Pste2g01411 2 15379342 15380590 ECH
Pste6g03707 6 26292068 26293475 Pste2g01411 2 15379342 15380590 PCT