Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01409 GGAAACCGGGAGTGAAAAATGGAGGAAAACCACAAGCACAAACACTGGATACGGTGGTGACGTGTCGGATACGATATAAATACCGTACTGTTTCGCCATTTTTGACTCATAGTCCACAGGCGGGAACCCCCATTTTCAGCAGAACCACCTCCTCTACCTCATGCCAGAACCAACCATGAATCTGCGCCACGGCACCAAGGTTTGGGTCCACGACAGAGATTCCGCTTGGATTCCTGCTGAAGTACTCGAATATTCTGGAAAGCAAGTTCGCCTTGCCACTGGTTCTGGCAAGATGGTCCTTGCTCTTCCGAAGAACGTGTTTCCCAGGGATGCAGACGAAGACGAGCACGGAGGAGTCGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGGGTCTTGTACAATCTCCGGAGAAGATATGCGCTGAACGATATTTATGTGAGTGTTTATGGAAGGATTTTGTTGGTATCTAGATGGACAACTAGGGTTTCTTCATGTTCTCAGTCTTTATTTGTTGATGACGAGATGCACACATATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTATGATACCCATATGATGGAGCAGTATAAGGGAGCTCAGTTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTCAGTGGTGAAAGTGGAGCTGGGAAAACTGAGACAACAAAATTGATCATGCAATATCTTACCTTTGTTGGTGGGCGTGCTGCTGCTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTCAGGAATGACAATTCAAGGAATCAGATTCAGAAGGATTTAAGTAGGAGTGGTGTTGTATTGATCTTTGAGATTAATGCTGAGGTTCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAACGGTAGAATATCTGGTGCTGCAATTAGAACATACTTACTAGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAAAGAAATTATCACTGCTTTTATCAATTGTGTTCTTCTGAAAGGGATGTAGAGAAGTATAAGTTGGGACATCCAAGCCATTTCCACTATTTGAATCAAAGCAAAGTCTATGAATTAGATGGCATAAACAGTGCTGAAGAGTACATGAAGACAAGGAGAGCAATGGATATTGTTGGCATTAATCATGATGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATTTAGGAAACATTGAATTTTCACCTGGAAAAGAGCATGACTCATCAGTAATAAAAGATGAGAAATCAAGATTTCATTTGCAGATGGCTGCTAATCTTTTTAGGTGTGATTTGAACCTACTGTTAGCAACATTATGTACCCGTTCAATACAAACTCGAGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCTGCTGTTGCGGGTCGGGATGCTTTGGCAAAAACTGTCTATGCTCATTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTCGGGCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGTTTTAAGGATAATAGTTTTGAGCAATTCTGTATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAGGAGGAGTACAGCAAAGAAGAAATCAACTGGAGCTATATTGAATTTATAGACAACCAAGATGTTTTAGATTTGGTTGAAAAGAAACCCATTGGTATGATTGCTTTGTTAGATGAAGCTTGCATGTTTCCAAAATCCACGCATGAAACATTCTCAACCAAGTTGTTTAAGCACTTCCTTTCTCATCCTAGGTTAGAAAAGGAGAAGTTTTCTGAAACAGATTTTACCCTTTCTCATTATGCTGGAAAGGTCACTTACCATACAAACACATTCTTAGACAAAAATCGTGATTATGTAGTTGTAGAACATTGTAATCTATTATCCTCTTCAAAATGTCCCTTCGTGGCGGCTCTTTTTCCTTTGCTAACGGAGGAGTCTTCAAGGTCCTCGTACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAAACGCTAAACACTACAGAGCCTCATTATATTCGATGTGTCAAGCCAAATTCTTTGAATCGACCACAAATTTTTGAGAATACTAGTGTCATACACCAATTACGCTGTGGGGGTGTACTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGTAACTCTGAAAATATTGCAAAAGCTAAAGTTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTTGCGTTTTAGACTCTAGACGAGCAGAAGTTTTGGACAATGCTGCTAAGTATATTCAGCGTCGGCTGCGAACATTTATTGCACGCAGGGATTTCATCTCAATCAAAGCTGCTGCAGTTTCTCTTCAAGCATGCTGCAGGGGATGCATTGGCCGAAAGATATATACTTCTAAACAGGAGACAGCAGCAGCTATCTCCATTCAGAAATTTATTCGTATGTGTCTGATGAGGCATGCTTATCTGAAATTATATTATTCTGCTATCATTATACAATCCAGTGTTCGTGGTTTTACAACTCGTCAAGGGTTCATGCGTAGAAAAGAGCACAAAGCTGCCACTTCTATTCAGGCCTATTGGAGAATGTGCAACATTCGGTCTGCCTTTCTAAAACATCAAAATTCAATTGTAGCAATACAATGTCTTTGGCGGTGTAGACAAGCAAAAAGAGAGCTTCGCAGACTTAAACAAGTGGCTAATGAAGCTGGAGCCTTGCGTTTAGCCAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTACACCTTGAGAAAAAAATAAGGGTTTCTAATGAAGAGGCTAAGCATATTGAGATTTCCAAACTACAGAAGATGTTAGATGATCTGAATCTTGAACTAGATGCAGCTAAACTGGCAACAATTAGTGAGTGCAACAAAAATGCAGTTTTGCAAAATCAGCTGCAGTTGTCAATAAAGGAAAAATCTAGTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTACGAAATGAAAATGCTCTATTAAAGGGTTCATTGGATGCTTTTGAAAAGAAGAGCACAACTTTGGAGCATGAGCTTGTGAATGCTCGGAAAGTCCATGATGAAACCATTAAAAAAATGAGGGAGTTTGAACATAAGTGTTCTGAACTTGGGCAAAATGTGAAAAGTCTCGAGGAAAAGCTATTGAGTTTAGAGGATGAAAATCATGTGCTTCGTCAGAAAGCCATAAGTGTATCTCCTAAAAGTAACCATCGAGGTTTCTCGAAGCCGTTATCTGAAAAATACTCAAGTGCAATAGCCCCCCGCACCGAGCAAAAGGCCATATTTGAATCACCAACACCTACAAAACTTATTCCCCATTTTACACCTGCCAGCTTGTCAGACTCACGTCGGTCAAAATTAACAACAGAGAGGCACCAGGATAACTATGAGCTCCTCTCTAGGTGTATCAAAGAGGATCTGGGGTTCAAAAATGATAAACCTCTAGCAGCTAGTATCATGTACAAATGTCTGCATCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATATTTGATTATATAATTGATGGAATTAATGATGTTCTAAGGGTTAGAGATGATGACAATGTCTTGCCATATTGGCTGTCAATACATCTGCACTTCTATGCCTTTTGCAAAGGAACCTGCATTCAAATGTGGTTGTCGTCAGAAGAGGAAGGGTTGTTGCCAGAAGCTACCGTCAACGTTGCTGTTGTTGGAATTGGTCATGAAGACGTTGGAGATGGTTGCTGGAATGTACTTGTCCTTGGCCTTGATTCTATGCAGAATGTTGAGTCGGGGCTGAGGTCTCCATTGAAGCTTATTGGTTATGATGATAGTACCTCACAGGTGGAGGCAAGATATCCTGCTATTCTTTTTAAACAGCAGCTAACTGCTTCTGTGGAGAAAATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTCTGGGATCATGTATTCAGGCACCTAAAACAGGTCGAGTTCAAGGTGGAAAATCATCTAGATCTCCTGGTGTGCTTCCTCAACAATCACCTGGTTCTCAATGGGACAACATCATCAAATTTTTGGATTCACTCATGAGCCGCTTGCATGCAAATCATGTACCATCCTTCTTCATCCGCAAGCTAGTTATTCAGGTCTTTTCCTTCATCAATATTACACTCTTCAACAGCCTTCTGTTGCGGCGGGAATGCTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGACTTGCAGAACTTGAGAAATGGATAGCAAATGCAAAAGAGGAGTATGCAGGAACTTCCTGGCATGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGCCCGGCATTGACTGTGAGGCAAATTTATCGAATTAGTACTATGTATTGGGATGACAAGTATGGAACCCAGAGTGTTTCGAATGAGGCAAGTTGTGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAGAGTTTGACATCCAATTCATTCTTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGATATCGATAAGGCTATCCCTGCTATAAATACTGATGATATTGATCTCCCAGCATTCTTGTGTGAATATCCCTGTGCCCAGTTTCTGATTTTACATGAGAAGTAATACATCTACTCTACAAGTGAAAGTCATTTAGCTTCAATATTTGATCTCTGGAATTAAATGGCAGCTCAACCAAGTCGGAAATGTTTCCATTCAAGTGGACAGCTATCTTAGTTGTCATCAGATTTACTGGTCTCATTACTGAATACATTTTTTGGTAACCAGACGATATTAATGACCAATCAGAGATGGAAGAATGATTTTTTGATCTGTAATTTCTCTCGGAATTACATAGTTAAGCGAGCAGCTGTAATTATAGTTAGGACTATAGTCTAGTCTTGACGTGCTGCTTCTATTATTATGCAGCCCATCTTCTCACCTGTATTTATCATTTAGATTCTATGTTGTATTGTATGTAGGTATGCAGTTCTAATCAGAGCCTTGTTGGCCAAAGAAATTGAAAGTTTTATTCATTGATGTAAAAATGCAGAACTCCAGCCCCTTCCGAGTTACATTTTTTATTCCTTTTAAACTTTCCTTGGTTGTGACTGCTTGATGCCAAGATGTACACTAGCTACAACACAATTGAATAATGATATCAATGATCGATCCTTTTAAAGTCTTGATTACGAGATAATGAGCTTTGTTGGTGG 5562 0.3964 MPEPTMNLRHGTKVWVHDRDSAWIPAEVLEYSGKQVRLATGSGKMVLALPKNVFPRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYVSVYGRILLVSRWTTRVSSCSQSLFVDDEMHTYTGSILIAVNPFTKLPHLYDTHMMEQYKGAQFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAADDRTVEQQVLESNPLLEAFGNARTVRNDNSRNQIQKDLSRSGVVLIFEINAEVRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSSERDVEKYKLGHPSHFHYLNQSKVYELDGINSAEEYMKTRRAMDIVGINHDDQEAIFCTLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHLQMAANLFRCDLNLLLATLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYAHLFDWLVDKINRSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLVEKKPIGMIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTNTFLDKNRDYVVVEHCNLLSSSKCPFVAALFPLLTEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQIFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKAVTLKILQKLKFENFQLGRTKVFLRAGQICVLDSRRAEVLDNAAKYIQRRLRTFIARRDFISIKAAAVSLQACCRGCIGRKIYTSKQETAAAISIQKFIRMCLMRHAYLKLYYSAIIIQSSVRGFTTRQGFMRRKEHKAATSIQAYWRMCNIRSAFLKHQNSIVAIQCLWRCRQAKRELRRLKQVANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKHIEISKLQKMLDDLNLELDAAKLATISECNKNAVLQNQLQLSIKEKSSLERELVAMDEVRNENALLKGSLDAFEKKSTTLEHELVNARKVHDETIKKMREFEHKCSELGQNVKSLEEKLLSLEDENHVLRQKAISVSPKSNHRGFSKPLSEKYSSAIAPRTEQKAIFESPTPTKLIPHFTPASLSDSRRSKLTTERHQDNYELLSRCIKEDLGFKNDKPLAASIMYKCLHHWHAFESERTAIFDYIIDGINDVLRVRDDDNVLPYWLSIHLHFYAFCKGTCIQMWLSSEEEGLLPEATVNVAVVGIGHEDVGDGCWNVLVLGLDSMQNVESGLRSPLKLIGYDDSTSQVEARYPAILFKQQLTASVEKIFGLIRDNLKKELSPLLGSCIQAPKTGRVQGGKSSRSPGVLPQQSPGSQWDNIIKFLDSLMSRLHANHVPSFFIRKLVIQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEASCVVSEMREIVSKDNQSLTSNSFLLDDDMSIPFSAEDIDKAIPAINTDDIDLPAFLCEYPCAQFLILHEK 1603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01409 1603 Coils Coil 1006 1026 - -
Pste2g01409 1603 PRINTS Myosin heavy chain signature 125 144 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 PRINTS Myosin heavy chain signature 536 564 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 PRINTS Myosin heavy chain signature 182 207 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 PRINTS Myosin heavy chain signature 229 256 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 PANTHER MYOSIN 56 1532 - -
Pste2g01409 1603 SMART iq_5 837 859 IPR000048 GO:0005515
Pste2g01409 1603 SMART iq_5 885 907 IPR000048 GO:0005515
Pste2g01409 1603 SMART iq_5 789 811 IPR000048 GO:0005515
Pste2g01409 1603 SMART iq_5 812 834 IPR000048 GO:0005515
Pste2g01409 1603 SMART iq_5 860 882 IPR000048 GO:0005515
Pste2g01409 1603 SMART iq_5 908 930 IPR000048 GO:0005515
Pste2g01409 1603 Coils Coil 1030 1050 - -
Pste2g01409 1603 ProSiteProfiles Dilute domain profile. 1317 1542 IPR002710 -
Pste2g01409 1603 ProSiteProfiles Myosin motor domain profile. 64 787 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 Gene3D Myosin VI head, motor domain, U50 subdomain 367 499 - -
Pste2g01409 1603 MobiDBLite consensus disorder prediction 1370 1388 - -
Pste2g01409 1603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 839 936 IPR027417 -
Pste2g01409 1603 Coils Coil 1603 1603 - -
Pste2g01409 1603 Gene3D - 722 788 - -
Pste2g01409 1603 CDD MYSc_Myo11 78 775 IPR036018 -
Pste2g01409 1603 Gene3D Kinesin motor domain 644 721 IPR036961 -
Pste2g01409 1603 ProSiteProfiles IQ motif profile. 813 842 IPR000048 GO:0005515
Pste2g01409 1603 ProSiteProfiles IQ motif profile. 790 819 IPR000048 GO:0005515
Pste2g01409 1603 Gene3D - 500 643 - -
Pste2g01409 1603 Pfam IQ calmodulin-binding motif 839 858 IPR000048 GO:0005515
Pste2g01409 1603 Pfam IQ calmodulin-binding motif 887 906 IPR000048 GO:0005515
Pste2g01409 1603 Pfam IQ calmodulin-binding motif 864 881 IPR000048 GO:0005515
Pste2g01409 1603 CDD MyosinXI_CBD 1169 1569 IPR037975 GO:0007015
Pste2g01409 1603 SMART DIL_2 1418 1525 IPR002710 -
Pste2g01409 1603 ProSiteProfiles IQ motif profile. 861 890 IPR000048 GO:0005515
Pste2g01409 1603 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 SMART MYSc_2a 58 788 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 Coils Coil 978 998 - -
Pste2g01409 1603 Gene3D Kinesin motor domain 13 350 IPR036961 -
Pste2g01409 1603 MobiDBLite consensus disorder prediction 1367 1388 - -
Pste2g01409 1603 Gene3D - 839 886 - -
Pste2g01409 1603 Gene3D - 887 937 - -
Pste2g01409 1603 Gene3D - 789 838 - -
Pste2g01409 1603 Coils Coil 922 966 - -
Pste2g01409 1603 Pfam Myosin head (motor domain) 119 245 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 Pfam Myosin head (motor domain) 267 775 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste2g01409 1603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 834 IPR027417 -
Pste2g01409 1603 Pfam DIL domain 1419 1522 IPR002710 -
Pste2g01409 1603 Coils Coil 1072 1106 - -
Pste2g01409 1603 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01409 Pste-Chr2 15356527 15393213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01409 6 1599 Myosins gene family AT4G33200 67.586 0.0 2149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01409 2 15356527 15393213 Pste2g01409 2 15356527 15393213 ECH