Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01407 TTTTAACTTTATTCCACAATATTCAAAAATATATTATTTTCTCTCTCTATGCTAGTATCAGTGGTAATTCACCAATGTATTATAGAGAGAGCGTGGTATGTGCCAGGGTGATGTGATGTAGCGTACCCTTCAAAACCAGAAAATGAAACACAAAAACCTTTCATCCCATCACATCATTTGAACCGCTTCTAGCTATGGGGTTTCAGTTTGGACTTCTTCTTCTGCTTTTCTCCTTTGTTTCGACTCGATCACTTCACACGACGGAGCAACGTTATTGGAGATAAAGAAGTCGTTGAGGGATGTGGACAACGTTCTGTATGACTGGACAGACTCACCTTCTTCTGATTATTGTGTCTGGAGAGGGGTTACATGTGATAATGTCACTTTCAATGTGGTTGCACTCAATCTTTCAGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAGCCTTAACAGTTTGGTCTCTATTGATCTCACGGAAAACCGTTTATCTGGCCAGATACCTGATGAGCTTGGTGATTGTTCCTCTTTGAAAAGCATACACTTTTCGTTTAACGAGATTCGAGGAGATATACCGTTTTCAATTTCGAAGATGAAACAACTGGAGAATCTAATTTTGAAAAATAATCAGCTAATTGGACCAATTCCTTCAACTCTCTCTCAGGTTCCTAACTTGAAGATTCTAGACCTGGCACAGAACAATCTTAGCGGGGAGATACCAAGACTTATATATTGGAATGAAGTTTTGCAGTATCTTGATGTGAGAAACAATAGCTTGACAGGCAGTATTCCTGAGAGCATAGGCAATTGTACTACTTTCGGGGTCTTGGATTTATCCTACAACAAACTAACTGGAGAGATACCATTCAATATTGGGTTTCTACAAGTAGCAACTCTGTCATTGCAAGGCAATAGATTCTCAGGGCATATTCCATCTGTGATAGGTCTTATGCAAGCGCTTACTGTCTTAGATTTGAGCTGTAACACATTAAGTGGACCAATCCCTTCTATCTTGGGAAATTTGACCTACACAGAAAAATTGTATTTGCATGGAAACAGGTTGACTGGCCTCATCCCCCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAATCATTTAAGTGGACGTATCCCACCTGAGCTTGGAAAGCTTATTGATCTGTTTGACCTAAATGTCGCTAACAACAACCTTGACGGTCCAATTCCTGATAATCTTAGCTCATGTAAAAACCTCAACAGCCTCAATGTGCACGGGAATAAGCTAAGTGGAAAAGTCCCCTCAGCTTTTCAGAGCTTGGAGAGTATGACCTATTTGAATCTTTCTTCAAACAATCTTCAAGGTTCCATTCCAATTGAACTTTCACGTATTGGTAACTTGGATACACTGGATATATCAAATAATAATATAACTGGTTCCGTTCCTTCTTCTATTGGCGATTTGGAGCATCTTCTGAAGTTGAATCTGAGCAGAAATCATTTAACTGGGTTTATTCCAGCAGAATTTGGTAATCTAAGAAGTGTCATGGATATTGACCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAATCAGCTTCAGAACATAATATCCTTTAATGTCTCTTATAACAACCTGGTTGGCATCGTTCCCACAAGCAACAATTTTTCAAGGTTTTCCTACGACAGTTTTATTGGAAACTCTGGTCTCTGTGGCTATTGGCTTGATTTGTCTTGTCATGGTCATGGGCCTCACCCTACACAGCGAGTTACCTTGTCTAAGGCAGCTATACTAGGAATTGCAATAGGCGCCCTTGTGATTCTTTTCATGATATTGCTAGCAGCTTGCCGGCCGCACAGTCCAGGTCCATTCTCTGATGGATCTTTTGACAAACCAGTTGATTACTCACCACCGAAGTTAGTGTTTCTTCATATGAATATGGCTCTTCATGTCTATGATGATATCATGAGGATAACTGAAAACCTAAGTGAGAAGTATATAATTGGGTATGGTGCGTCGAGTACAGTTTATAAATGTATTCTTAAGAATTGCAAGCCGGTGGCCATCAAGAAGCTCTATTCCCATCCGCAGTGCTTGAAAGAGTTTGAGACTGAGCTTGAAACAGTTGGCAGCATTAAGCACAGAAATCTGGTCTGTCTCCAAGGCTACTCTTTGTCTCCGTATGGAAACCTTCTCTTTTATGACTACATGGAAAATGGTAGTCTATGGGATCTTCTACATGGGCCTACCAATAAGAAAAGGCTTGATTGGGATCTTCGTCTAAAAATAGCACTCGGATCAGCCCAAGGGCTTGCTTATCTACACCATGATTGCAGTCCACGTATCATTCACAGAGATGTCAAATCGTCTAATATTTTATTAGACAAAGACTTTGAGCCCCATCTCACCGATTTTGGCATTGCAAAAACTCACACTTCAACTTATGTAATGGGCACAATAGGCTACATAGACCCCGAGTACGCTAGAACTTCCCGGCTCACTGAGAAGTCTGATGTGTATAGCTATGGTATTGTATTGCTGGAGCTTCTAACTGGGAGGAAAGCTGTTGACAACGAATCAAACCTCCATCATCTGATTTTGTCCAAGACAGCTAATGATGCCGTAATGGAAACAGTTGATGCCGATATTACTGCTACATGCAAGGACATGGGAGCAGTAAAGAAGGTTTTTCAGCTTGCTCTTTTGTGCACAAAGAAGCAACCAGTTGATAGGCCCACAATGCATGAGGTGACTCGAGTGCTGGGAAGTCTTGTGCCATCCATCAATCTACCAAAACAATCAGTTCCGACACAGGGTCTACTACCTGATTCACAGCCATGTGCTAAAATGCAATGCTACAAGGATGAATATGCAAATCTTAAAACTCCACACTTAGTGAACTGTCCATCCATGAGCACCTCTGATGTCCAACTCTTCCTCAAATTTGGAGAAGTAATATCCCAAAACAGTCAGTCAGGATTTTGTGAATCAAATTGACAATCAATGTATATTTAAGCCTCAAAGGAAAAATGTCAAATATCTTTATGCAATATGATCCGTGTGGATAAACTAGAAAAATCACTCAAGTATTTTTCCTTTGCCTAGGTTTTTTTACTGCATTAATTTTACGTTTATCTAGAAGTCATATTTTAGAAAATATGTAATAGAAGCGAAATAAATATATAAAAATATACGATGAC 3207 0.3979 MKQLENLILKNNQLIGPIPSTLSQVPNLKILDLAQNNLSGEIPRLIYWNEVLQYLDVRNNSLTGSIPESIGNCTTFGVLDLSYNKLTGEIPFNIGFLQVATLSLQGNRFSGHIPSVIGLMQALTVLDLSCNTLSGPIPSILGNLTYTEKLYLHGNRLTGLIPPELGNMTKLHYLELNDNHLSGRIPPELGKLIDLFDLNVANNNLDGPIPDNLSSCKNLNSLNVHGNKLSGKVPSAFQSLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISNNNITGSVPSSIGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELNQLQNIISFNVSYNNLVGIVPTSNNFSRFSYDSFIGNSGLCGYWLDLSCHGHGPHPTQRVTLSKAAILGIAIGALVILFMILLAACRPHSPGPFSDGSFDKPVDYSPPKLVFLHMNMALHVYDDIMRITENLSEKYIIGYGASSTVYKCILKNCKPVAIKKLYSHPQCLKEFETELETVGSIKHRNLVCLQGYSLSPYGNLLFYDYMENGSLWDLLHGPTNKKRLDWDLRLKIALGSAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEPHLTDFGIAKTHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANDAVMETVDADITATCKDMGAVKKVFQLALLCTKKQPVDRPTMHEVTRVLGSLVPSINLPKQSVPTQGLLPDSQPCAKMQCYKDEYANLKTPHLVNCPSMSTSDVQLFLKFGEVISQNSQSGFCESN 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01407 801 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 90 - -
Pste2g01407 801 Gene3D Ribonuclease Inhibitor 1 96 IPR032675 -
Pste2g01407 801 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 95 187 - -
Pste2g01407 801 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515
Pste2g01407 801 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Pste2g01407 801 Pfam Leucine rich repeat 198 253 IPR001611 GO:0005515
Pste2g01407 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Pste2g01407 801 SMART LRR_typ_2 288 311 IPR003591 -
Pste2g01407 801 SMART LRR_typ_2 120 144 IPR003591 -
Pste2g01407 801 SMART LRR_typ_2 168 192 IPR003591 -
Pste2g01407 801 SMART LRR_typ_2 312 335 IPR003591 -
Pste2g01407 801 SMART LRR_typ_2 25 49 IPR003591 -
Pste2g01407 801 SMART LRR_typ_2 240 264 IPR003591 -
Pste2g01407 801 SUPERFAMILY L domain-like 2 370 - -
Pste2g01407 801 SMART serkin_6 465 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01407 801 Pfam Protein kinase domain 468 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01407 801 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 436 539 - -
Pste2g01407 801 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 281 - -
Pste2g01407 801 Pfam Leucine Rich Repeat 52 73 IPR001611 GO:0005515
Pste2g01407 801 Gene3D Transferase(Phosphotransferase) domain 1 540 736 - -
Pste2g01407 801 PANTHER LEUCINE RICH REPEAT KINASE 2 101 727 - -
Pste2g01407 801 ProSiteProfiles Protein kinase domain profile. 465 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01407 801 ProSiteProfiles Leucine-rich repeat profile. 27 49 IPR001611 GO:0005515
Pste2g01407 801 FunFam Leucine-rich repeat receptor-like protein kinase 290 384 - -
Pste2g01407 801 ProSitePatterns Protein kinases ATP-binding region signature. 471 494 IPR017441 GO:0005524
Pste2g01407 801 SUPERFAMILY Protein kinase-like (PK-like) 443 724 IPR011009 -
Pste2g01407 801 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 540 735 - -
Pste2g01407 801 Gene3D Phosphorylase Kinase; domain 1 439 539 - -
Pste2g01407 801 Gene3D Ribonuclease Inhibitor 97 385 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01407 Pste-Chr2 15340550 15348306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01407 1 728 Receptor kinase-like Gene Family AT5G07180 62.197 0.0 973
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pste2g01407 Pkinase 4.7e-42 CL0016