Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01402 CCGAGATGCCGTGAGTGAAAAAAAGGAGCAATGATTATCCATTGCAAGCTGCCAGTAATTAAACACGTGCTGCATTAAAAGCGTTTCAAATATTCAATGAAGGCCTCCTACCATGCTGCGCAATTAGCAGGTGACATGAAAAACTCGTGGTTCACAACTTCTCTTCTTCCCCACGACTATGGCTACTCATCTCCTTAGACTTTCTCTCTCCTCCCAGCCCAAGCTCTGCTTCAATTACGCACCCAATCATGTTCACCATTTCACTTCTCCGTTGCCGGCTAAACCACGTCGCAGCCGCAACTGTCACCGCCGTCAATTTCTCCGCCCGCGCTTCACCGTATCCAACTCCTTCGGGACCGAGATTGGCTCCTCGGGCTCGACTCTCATCGAAGACCGCAAAGATAACAAAGACTCTCCGGTTCTGCTCGACGTTACGGGAATGATGTGCGGCGCGTGCGTCTCCCGAGTCAAAAACATCCTGTCCGCTGACCACCGAGTCGACTCGGTTGTGGTCAACATGTTGACCGAGACCGCCGCCGTTAAGCTGAGGCGGATCGAGGAGGAGCCAGCGAGCGTCGCGGAGAGCCTTGCTCGGAGACTAAGCGATTGCGGATTTCCGACCAAGAGGAGGGCGTCCAGTTCGGGAGTGACGGAAAACGTGAGGAAGTGGAAGGAGTTGGTCAAGAAGAAGGAGGAATTGGTCGCTAAGAATCGAAGCCGCGTTGCGTTCGCTTGGACATTGGTCGCCTTGTGCTGCGGATCGCACGCTTCGCATATTTTTCACTCCTTGGGGCTTCACATTGCTCATGGAACGCTTTTGGAAACTCTTCACAGTTCATACGTTAAAGGTGGTTTAGCTTTGGGGGCTCTATTGGGACCAGGACGAGAGTTACTCTTTGATGGCCTAAATGCGTTTAAGAAGGGATCTCCTAATATGAACTCTCTCGTGGGATTTGGTTCTATGGCTGCTTTCATCATTAGTTCGATCTCACTACTTAACCCTGGCCTGGCATGGGATGCATCATTCTTTGACGAACCGGTCATGCTTCTTGGTTTCGTGCTACTGGGACGTTCTCTGGAGGAAAAGGCAAGGATTCAAGCATCTAGCGATATGAATGAGCTGCTTTCACTGATATCTACTCAGTCAAGACTTGTAATTACTTCAACAGAAAGTTCACCTTCTACTGACACTGTGCTTTGCTCTGACACAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGATTCAGTGTTGGTGTTGCCTGGCGAAACTGTTCCTATAGATGGTAAGGTCATTTCAGGAAGAAGTGTGGTAGATGAGTCCATGCTTACAGGGGAATCACTTCCTGTATTTAAGGAGAAAGGCCTCACAGTTTCAGCTGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCCAACACTATGATATCCAAGATTGTACGAATGGTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATACAGTGTAATGACTCTATCCGCAGCAACATTTGCATTTTGTGCCTTGTGGTTGGGTTTCCTAATTAGAAACCTAACATTTTTGGTCCGACCTGCCAGATCGAAGACGAGGTGCGAGAGAATTAACATGGAGGGAAGGGTTGACGGAAGATTCAATGTGATGGAGGGACGGTTGGAGACGGTAGAAATTGCAGTTGACGGGATTAAGGCGAAGACGGGAGCGCTACGCCAAGATACGACGGAGGATAGTCAATCTTCGGTCAATGCAAATGTACAGCAAAACGAGAACGAGGGAGGAGGAAGAATCAGGAAACACGAGCACCCTCCGAATTGGAGAAAGAGGGTTGAATTGCCCACATTTGAAGCTGACATACATAAGTATGGAGGGCAGTGCCGGGTATTGGTTCCGCTTCTGGAAGGAGAAGGCCAAGAACCGATCTTGGTCGGGGTTGAAGGAAGCACTGTAGCGCGATTTGGGGAAAGAGGCAGGGGAACCATTTTTGAAAGGTTGACCACCATCAAGCAAACCGGGACGGTGGATGAATTTATCAAAGAATTCGAAATCTTGGTAGGACAAACATCGAAACTACCAGAGGAGATTCTGTTGGGGTATTTCATGGGTGGTTTACAGGAACCGATACGCAGCCAAGCCGATGGGACGGTGTCGCGAGTTGAAACCGTCCGTCAAAACTCGGGCCGAACGGGTCCAACAGAGGAGTGGAGGTCGGTACGAGAAGTAACCAGCGAGCGAAGCGGCATCGAAATGGCGAAAACAGAGGCCGAAACTTCCGCAACTTACCTTACGCGGAATACGGGAAACGCAGGGAAGAGGGCAAGTGTTTTAGGTGTGGGGGGCCTTTCGGACCTGGACATCAATGCCCAGAAAAGAATGGAACTCTCGGCATGTTCTGCTGGGGGCCTAACGCATGCCAAGACGATGAAGATGCAGGGAGAGATCAAGGGGAGAAGGGTGATAGTATTGGTTGATAGCGGAGCTAGTCACAACTTCATTAATAGAGAACTGGTGGAGGAACTGGGGTTGACCACAACGGACACTAAGCCGTACATGGTTAGTCTAGGGGATGGGTGGAAGAAGGAGACCCGATGGTGCTGTGAAGGGGTGCAAATTCGTATAGGGGACGTGGAGGTCACCACGAGAGTACACTTGTTTGACTTGGGAGGTGTGGATGTGCTTATGGGGGTAGAATGGCTGGTTAAGCTGGGGAAGGTGACTCTGGATTGGAAGAACTTGACGATGACCTTCAACCAAGATGGTAAGGAGGTGACTATCAAGGGGGATCCTAAACTAGCCAGAAGCTTGGTGACTCCGGAGGCGCTATTAAAAATAAAGGAGGTAGAGGCGTGGATGTTAGTTTGGGAATTGGGCGAGATGGAGAAGGGGGATGGTGAAATTAATGAACAGGGAATAACAGAGGACCAAAGAAGGGAGATGGATGAACTGTTGAACCAGTTTATTCCAGGGGAAACGACTGTGGAAGCAGTTGCTCAAGAATTACAAACACGAGACGAAGCTTTGAAACAATTGAAGTTTCATTTAGTACGGGCACAAGAGCTCATGGTCAGACAGGCCAATAAGAAAAGGAGGGCAGAGATATTGAAGAGGAGATTGGTATATCTCAAGATTAGGCGGATAGACAAACATCGATGCCATCTAAATTGCACGCTAAGCTGGCGGCACGATATTATGGGTCATATCAGGTTGAACAAAAGGTGGGGAAGGTGGCTTATAAACTCAAGCTACCAACATCAGCTCGTATACACCCAGTTTTCCATGCTTCCAAAATTGAAGAAGGCGGTGGGAGAAAGGACTATTGAGAAGGAGCTGCCTGAAGATCTGCAAGGGAAGGGCCATCTTATTGGCCTACTAAGGTACTCAGTGGGATCACACATATTTCCTGATGTTTTGCTCAACGATATTGCAGGCCCAGAAGGAGATCCTTTGCTTTTGAGTTTAAAACTAGCCGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCACTGGGTCTTGCTACGCCCACAGCAATCTTGGTTGGCACCTCACTTGGGGCAAGAAAAGGACTTCTTATTAGAGGAGGGGATGTGCTGGAACGGTTGGCAAGAATAAATTATATTGCTCTAGACAAGACAGGAACCCTTACCAAAGGAAAACCAGTTGTGTCAGCCGTAGGTTCTATCCATTATGGAGAGTCTGAAATTCTTCAGATTGCTGCTGCAGTGGAGAAAACTGCTTCTCACCCTATAGCAAAGGCTATTGTCAATAAAGCCGAGTCACTAGAGTTGATTCTTCCTGTCACAAAGGGGCAGTTAGTTGAACCAGGTTTTGGAACTTTAGCAGAAATAGATGGAAATTTGATTGCTGTTGGGTCTTTAGAATGGGTTCTTGAACGCTTCCAGACAAAAACAAACCCATCTGATTTGACAAATCTGGAACACAATTTAATGAATCATTCATCGAATACAGCAACTTCAAAATATTCGAAAACTGTTGTGTATGTTGGACGTGAAGGAGAGGGCATCATTGGTGCTATTGCCATATCTGACACTGTGCGTGAAGATGCTGAATCTACTGTAACGAGGCTCAAGAAGAAGGGGATTAAAACAGTCCTATTGTCAGGAGACAGGGAAGAGGCAGTTGCAACAGTAGCAGATACAGTTGGTATTGAAAATGATTTTGTCAAAGCATCTTTGTCTCCACAACAGAAATCTAAATTTATTTCCTCTCTGAAAGCTGAAGGACATCATGTTGCAATGGTAGGTGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAAAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCTATTATACTTCTGGGGAACAAAATTTCACAAGTTGTTGATGCGCTAGATCTTGCACAGGCAACAATGGGAAAAGTGTATCAAAATTTGTATTGGGCGGTCGCCTATAATGTTGTTGCCATTCCCATTGCTGCTGGTGCGTTACTTCCCCAATTTGACTTTGCTATGACACCGTCACTTTCAGGAGGACTGATGGCTCTGAGCTCCATCTTCGTGGTTGGCAACTCACTTCTTCTACAGCTTCATGGGTCTAAGATCTCTAGAAAGGGCTAACTCTATATCTTCCCATTCCAACACAGATGTGCTTAATGTAAAATAAGCATTAAGCATACCCTCTTATATTTTCTGCATATGGTGTGGGTATTACTGTAATAATAGTAAGAGTTTAAAAGTGGTGTCCTGGTAATGTAACATAATTTTATATTACCAATCATAAATCATAATCATTATCGG 4861 0.467 MATHLLRLSLSSQPKLCFNYAPNHVHHFTSPLPAKPRRSRNCHRRQFLRPRFTVSNSFGTEIGSSGSTLIEDRKDNKDSPVLLDVTGMMCGACVSRVKNILSADHRVDSVVVNMLTETAAVKLRRIEEEPASVAESLARRLSDCGFPTKRRASSSGVTENVRKWKELVKKKEELVAKNRSRVAFAWTLVALCCGSHASHIFHSLGLHIAHGTLLETLHSSYVKGGLALGALLGPGRELLFDGLNAFKKGSPNMNSLVGFGSMAAFIISSISLLNPGLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSTESSPSTDTVLCSDTICVEVPTDDIRVGDSVLVLPGETVPIDGKVISGRSVVDESMLTGESLPVFKEKGLTVSAGTINWDGPLRIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFCALWLGFLIRNLTFLVRPARSKTRCERINMEGRVDGRFNVMEGRLETVEIAVDGIKAKTGALRQDTTEDSQSSVNANVQQNENEGGGRIRKHEHPPNWRKRVELPTFEADIHKYGGQCRVLVPLLEGEGQEPILVGVEGSTVARFGERGRGTIFERLTTIKQTGTVDEFIKEFEILVGQTSKLPEEILLGYFMGGLQEPIRSQADGTVSRVETVRQNSGRTGPTEEWRSVREVTSERSGIEMAKTEAETSATYLTRNTGNAGKRASVLGVGGLSDLDINAQKRMELSACSAGGLTHAKTMKMQGEIKGRRVIVLVDSGASHNFINRELVEELGLTTTDTKPYMVSLGDGWKKETRWCCEGVQIRIGDVEVTTRVHLFDLGGVDVLMGVEWLVKLGKVTLDWKNLTMTFNQDGKEVTIKGDPKLARSLVTPEALLKIKEVEAWMLVWELGEMEKGDGEINEQGITEDQRREMDELLNQFIPGETTVEAVAQELQTRDEALKQLKFHLVRAQELMVRQANKKRRAEILKRRLVYLKIRRIDKHRCHLNCTLSWRHDIMGHIRLNKRWGRWLINSSYQHQLVYTQFSMLPKLKKAVGERTIEKELPEDLQGKGHLIGLLRYSVGSHIFPDVLLNDIAGPEGDPLLLSLKLAVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLARINYIALDKTGTLTKGKPVVSAVGSIHYGESEILQIAAAVEKTASHPIAKAIVNKAESLELILPVTKGQLVEPGFGTLAEIDGNLIAVGSLEWVLERFQTKTNPSDLTNLEHNLMNHSSNTATSKYSKTVVYVGREGEGIIGAIAISDTVREDAESTVTRLKKKGIKTVLLSGDREEAVATVADTVGIENDFVKASLSPQQKSKFISSLKAEGHHVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMGKVYQNLYWAVAYNVVAIPIAAGALLPQFDFAMTPSLSGGLMALSSIFVVGNSLLLQLHGSKISRKG 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01402 1500 SFLD C1.7: P-type atpase like 1148 1431 - -
Pste2g01402 1500 Pfam Retroviral aspartyl protease 774 877 - -
Pste2g01402 1500 SUPERFAMILY HAD-like 1163 1486 IPR036412 -
Pste2g01402 1500 Gene3D - 1176 1309 IPR023299 GO:0000166
Pste2g01402 1500 Gene3D - 305 436 - -
Pste2g01402 1500 CDD HMA 83 147 IPR006121 GO:0046872
Pste2g01402 1500 SFLD p-type atpase 1148 1431 IPR044492 -
Pste2g01402 1500 SUPERFAMILY Calcium ATPase, transduction domain A 341 432 IPR008250 -
Pste2g01402 1500 FunFam Copper-transporting ATPase 1, putative 305 436 - -
Pste2g01402 1500 Pfam Heavy-metal-associated domain 83 146 IPR006121 GO:0046872
Pste2g01402 1500 CDD retropepsin_like 769 859 - -
Pste2g01402 1500 MobiDBLite consensus disorder prediction 531 551 - -
Pste2g01402 1500 Pfam E1-E2 ATPase 333 481 - -
Pste2g01402 1500 FunFam Copper-transporting ATPase PAA2, chloroplastic 1176 1309 - -
Pste2g01402 1500 MobiDBLite consensus disorder prediction 531 561 - -
Pste2g01402 1500 NCBIfam HAD-IC family P-type ATPase 1111 1470 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g01402 1500 ProSiteProfiles Heavy-metal-associated domain profile. 79 149 IPR006121 GO:0046872
Pste2g01402 1500 ProSitePatterns E1-E2 ATPases phosphorylation site. 1167 1173 IPR018303 -
Pste2g01402 1500 Gene3D Acid Proteases 754 885 IPR021109 -
Pste2g01402 1500 SUPERFAMILY Acid proteases 768 862 IPR021109 -
Pste2g01402 1500 Pfam haloacid dehalogenase-like hydrolase 1161 1392 - -
Pste2g01402 1500 Gene3D - 73 152 - -
Pste2g01402 1500 Gene3D - 1156 1429 IPR023214 -
Pste2g01402 1500 SUPERFAMILY HMA, heavy metal-associated domain 80 146 IPR036163 GO:0046872
Pste2g01402 1500 NCBIfam heavy metal translocating P-type ATPase 1111 1489 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pste2g01402 1500 PANTHER ATP7, ISOFORM B 1089 1491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01402 Pste-Chr2 15282800 15295870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01402 245 476 Primary Pumps ATPases AT1G63440 35.319 4.14e-31 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01402 2 15282800 15295870 Pste2g01402 2 15282800 15295870 ECH