Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01401 ATGCCTCTCCGAGTGCTCAAAGCTGAAGCTACTTCCCCCTCTAATGAGTCACCGAAACCACATAAATCTGGATCATTGTGTTACATTCTCGGAGGAATAATTGTGGCCATAGTGTTGATTTTTTTATATGTATTTCGGAAACGTACTAAACTGCAAAAACAGACCACCACAGCTACAACTAAAGAGCAGCAAGTTTTTGGGAAACACAATGAATCGGCAGAGGTGATGAGGATGATATTTTCATCTAATCAGCAATCAGGATCCAAGGAGTTCTTTAGTGGGAACCTTCGGACTATTAGCTGCTTTGACTACCAGACATTGAAGAAAGCAACCAACAATTTCCATGCAGATAACCTTCTTGGAAGTGGTGGTTTTGGACCTGTTTACCAGGGAACGTTGATAGATGGAAGGCTAATTGCTGTGAAGAAATTGTCTCTCAACAAATCCCAACAAGGAGAAAAAGAATTTCTGGTAGAAGTAAGAACAATCACAAGTATCCAACATAAAAATTTGGTTCGCCTTGTGGGATGCTGCATAGATGGGCCTCAAAGGATACTTGTCTATGAATACATGAGAAACAGAAGTTTGGACCTCTTCATACATGGAAACAGTGACCAATTTTTGAATTGGAACACTCGATTCCAAATAATTTTGGGAGTAGCACGCGGACTACAATATCTACACGAGGATTCACACCAAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTCAGCCAAGGATTGGAGATTTTGGGCTAGCTAGATTTTTCCCTGAAGACCAAGCTTATCTTAGCACACAGTTTGCTGGAACATTAGGTTATACAGCTCCTGAGTATGCTATTAGAGGAGAATTGTCGGAAAAGGCAGATATCTATAGTTTTGGAGTTCTTGTACTTGAAATAATATGCTGCAGGAAAAATACAGAGCATATTTTGTCACCAGAAAAGCAGTACCTCCCTGAATATGCGTGGAAACTGTACGAGAATGCAAGGATATTGGACATTGTAGATCCAAAACTGCGACAAGATGGATTCGTAGAAAAGGATGTCATGCAAGCAATCCACGTGGCTTTCTTATGTCTTCAGCCTCATGCACATTTGAGACCTCCCATGTCACAGATCGTGGCATTGTTGACATTCAAAATTGAAATGGTTACAACACCACTGAGGCCAGCCTTCCTTGATCGAATGCCAAGAAAGGATCATGAGAACCACTCTTTGAAAGCATTATCTCAGGATTTTACATCTCCTATATATACTTGA 1284 0.405 MPLRVLKAEATSPSNESPKPHKSGSLCYILGGIIVAIVLIFLYVFRKRTKLQKQTTTATTKEQQVFGKHNESAEVMRMIFSSNQQSGSKEFFSGNLRTISCFDYQTLKKATNNFHADNLLGSGGFGPVYQGTLIDGRLIAVKKLSLNKSQQGEKEFLVEVRTITSIQHKNLVRLVGCCIDGPQRILVYEYMRNRSLDLFIHGNSDQFLNWNTRFQIILGVARGLQYLHEDSHQRIVHRDIKASNILLDDKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIICCRKNTEHILSPEKQYLPEYAWKLYENARILDIVDPKLRQDGFVEKDVMQAIHVAFLCLQPHAHLRPPMSQIVALLTFKIEMVTTPLRPAFLDRMPRKDHENHSLKALSQDFTSPIYT 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01401 427 Gene3D Transferase(Phosphotransferase) domain 1 191 393 - -
Pste2g01401 427 SUPERFAMILY Protein kinase-like (PK-like) 94 388 IPR011009 -
Pste2g01401 427 ProSiteProfiles Protein kinase domain profile. 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01401 427 Gene3D Phosphorylase Kinase; domain 1 70 190 - -
Pste2g01401 427 SMART serkin_6 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01401 427 CDD STKc_IRAK 120 386 - -
Pste2g01401 427 Pfam Protein tyrosine and serine/threonine kinase 116 383 IPR001245 GO:0004672|GO:0006468
Pste2g01401 427 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 191 395 - -
Pste2g01401 427 MobiDBLite consensus disorder prediction 1 22 - -
Pste2g01401 427 FunFam Cysteine-rich receptor-like protein kinase 10 78 190 - -
Pste2g01401 427 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 44 412 - -
Pste2g01401 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01401 Pste-Chr2 15276736 15281516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01401 102 423 Receptor kinase-like Gene Family AT1G56120 46.273 4.39e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste2g01401 PK_Tyr_Ser-Thr 9.6e-47 CL0016