Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01343 ACAACACAGAACACTGATGCCAAATCCAATGGTGTACGGACAAATTCAGTGTTTAATCCTTAAATGCCTCGTACCAGCTTTTAAGGACCGCAACACCATTCTTATTCTCATTCTAATTTCCACAATCAACACAACACAACCGAAGCATCTCTTTTCTCTCTTGTGACCTCATCAGTCATGCCCCCAACTTCATATACACACACGTCCTCTTCCTTAACCCCTATATATATATATATATATATTCTTCTCCACTTTTGAACCTGAATTATCCTTAAAGCCATGAACTTTCGAACTGGGTTCTCGGATTCAAACGACGTCAGCAACAGTGCCGGCGAGGCCAATTCAAGCGTTTCCGATGTGACCCCACTCAGCCTTCTCTCGGAGCACCTGGGGTCAATATTGGACCACGGGGTTGACTTTTTCTCCGACGCCCAGATCGTCGCCGGCGACGGCCGCGAAGTGGCCGTGCACAGGTGCATTCTGGCGGCACGGAGTGGCTTCTTCAGGAACGCGTTCGCCGGAGGCGGCGTGCTGCGGCTGAAGGAACTGGCCAAGGACTATGATGTTGGGTTGGAAGCGCTTTTGATTGTTCTGGCTTTTTTGTACAGTGGGAAAGTGAAGGCTTTCCCTCAAGGTGGTGTTTGTGTGTGTGTTGATGATTTGTGTCCACACTTTGGCTGTAGGCCTGCTGTGGATTTCTTGCTTCAGTTGCTCTATGCTTCCTCCACTTTTCAACTACCTCAGTTGGTTGCTCTTTATCAGGGGCATCTACTAGACATTCTTGATAAGGTGGCAATAGATGACATTTTGGTGGTTCTATCGGTCGCAAATATATGTGGCAATATGTGTGATGAACTGCTAGCAAGGTGCACTGAGAAAATGGTTAAATCTGATGCTGATATTACCACTCTTGAAAAGGCACTGCCTCAATCATTGGTGAAACAAATCATAGATAAACGAAGAGAACAAGGCTTGTACATGGCTGAAAACGTCAATTTTCCTGACAAACATGTCAACAGAATACACAGGGCACTGGATTCAGACGATGTGGAACTAGTAAGATTGCTTTTGAAAGAGGGGCACACCACTCTTGATGATGCTTACGCACTCCACTATGCTGTTGCATACTGTGATGTGAAGACCACCAATGAGCTTCTTGATCTTGGTCTTGCTGATGTCAACCACAAAAACCATAGGGGCTATAGTGTGCTGCATGTTGCTGCAATGAGGAAAGAGCCTAAGATTATAGTTTCTCTCTTGACAAAGGGGGCACAGCCTTCTGATCTTACTTTGGATGGTAGAAACGCCCTTCAGATTTCAAAGCGTCTCATCAAAGCTGTGGATTATTACAAGTCCACAGAGGAAGGAAAGGTGTCATCCAATGATCGCTTGTGCTTAGAAATATTGGAGCAAGCTGAGAGAAGAGAGCCTTTACTTGGAGAGGCATCTCTTTCTCTTGCTATGGCAGGGGATGATGTGCGCATGAAATTGTTGTACCTAGAAAATAGAGTTGGACTGGCGAAAGTTCTGTTTCCCATGGAGGCAAAGGTTATTATGGACATTGCTCAAATTGATGGCACATCTGAATTTCCATCCTCAGACATGTACTGTTCAAATATCAGTGATCACCAGAGGACAACTGTGGACTTAAACGATGCACCTTTCAGAATGAAGGAAGAGCATCTAGTTAGGTTGAGAGCACTGTCCAGAACAGTGGAGTTGGGGAAACGCTTCTTCCCTCGTTGCTCAGAAGTGTTGAATAAGATCATGGATGCTGATGACCTATCTCAGCTTACATGTATGGGTGATGATAGTCCTGAAGATCGACTAAGGAAGAAAAGAAGGTATGTGGAGCTCCAAGACCTTCTGAATAAGGTCTTTAGTGAGGACAAGGAAGAGTTTGATAGGTCTGCCATGTCATCATCCTCCTCCTCCACATCAATTGGAGTAGTGAGACCAAATGGCAATATAACCATGAAGAACTAGATGAAAATAATGTGTTCCTGGATGCATCCTTTTTACTTGATTTTGTTAGTTTTTGTTTAGCCATTCTCTTTTTCTTTACTTTATTGTATTTTTGTATTTCATTTATCAAGG 2097 0.4411 MNFRTGFSDSNDVSNSAGEANSSVSDVTPLSLLSEHLGSILDHGVDFFSDAQIVAGDGREVAVHRCILAARSGFFRNAFAGGGVLRLKELAKDYDVGLEALLIVLAFLYSGKVKAFPQGGVCVCVDDLCPHFGCRPAVDFLLQLLYASSTFQLPQLVALYQGHLLDILDKVAIDDILVVLSVANICGNMCDELLARCTEKMVKSDADITTLEKALPQSLVKQIIDKRREQGLYMAENVNFPDKHVNRIHRALDSDDVELVRLLLKEGHTTLDDAYALHYAVAYCDVKTTNELLDLGLADVNHKNHRGYSVLHVAAMRKEPKIIVSLLTKGAQPSDLTLDGRNALQISKRLIKAVDYYKSTEEGKVSSNDRLCLEILEQAERREPLLGEASLSLAMAGDDVRMKLLYLENRVGLAKVLFPMEAKVIMDIAQIDGTSEFPSSDMYCSNISDHQRTTVDLNDAPFRMKEEHLVRLRALSRTVELGKRFFPRCSEVLNKIMDADDLSQLTCMGDDSPEDRLRKKRRYVELQDLLNKVFSEDKEEFDRSAMSSSSSSTSIGVVRPNGNITMKN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01343 568 ProSiteProfiles BTB domain profile. 49 117 IPR000210 GO:0005515
Pste2g01343 568 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 217 370 - -
Pste2g01343 568 Pfam BTB/POZ domain 47 157 IPR000210 GO:0005515
Pste2g01343 568 Gene3D Potassium Channel Kv1.1; Chain A 14 199 IPR011333 -
Pste2g01343 568 MobiDBLite consensus disorder prediction 541 568 - -
Pste2g01343 568 SMART ANK_2a 272 302 IPR002110 GO:0005515
Pste2g01343 568 SMART ANK_2a 306 335 IPR002110 GO:0005515
Pste2g01343 568 SMART ANK_2a 243 271 IPR002110 GO:0005515
Pste2g01343 568 Pfam NPR1/NIM1 like defence protein C terminal 348 553 IPR021094 -
Pste2g01343 568 SMART BTB_4 49 168 IPR000210 GO:0005515
Pste2g01343 568 MobiDBLite consensus disorder prediction 1 24 - -
Pste2g01343 568 CDD BTB_POZ_NPR_plant 32 168 - -
Pste2g01343 568 PANTHER REGULATORY PROTEIN NPR3 6 555 IPR044292 GO:0009862|GO:2000022|GO:2000031
Pste2g01343 568 SUPERFAMILY Ankyrin repeat 237 348 IPR036770 -
Pste2g01343 568 MobiDBLite consensus disorder prediction 545 568 - -
Pste2g01343 568 SUPERFAMILY POZ domain 32 165 IPR011333 -
Pste2g01343 568 Pfam Ankyrin repeats (3 copies) 249 333 IPR002110 GO:0005515
Pste2g01343 568 ProSiteProfiles Ankyrin repeat profile. 306 338 IPR002110 GO:0005515
Pste2g01343 568 Gene3D - 200 432 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01343 Pste-Chr2 14766310 14769839 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste2g01343 NPR1_like_C 3e-87 No_clan