Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01341 GAGAGAGGGAGGGTGAATTTTGCCTTGTTCCTCTCTCTCTCTCTCTCCGATCGTTTCTGGTGCGTACGCATCCGTGGCGGCACTCCCTCGTTGACATACATTTACCATGTCTGTTCAACAGCAAGGCGGTGCCGCCGCACTGCAAAACATCACAATGGTCGCTGTTGACAAAGACAAGAACAGTTCCTATGCTTTCCGTTGGGCTGTTAATCATCTCGACAACCCCGTCATCATTGCCGTCCATGTCAAGCACAAAAACTTTTCTCACCATGTCACCAACGTGTTCCCACCTGACGAAGAGGATGTCGCCAACATTTTCAACTCCTTGCGTGGAATGTGTACTCGCAAAGCTGTATGCCTTCCTTCCTTTCTTCACATGCATTTTCTATATTATTTCCTGCTCATCATCATTTCGCTCGTTCAGGTCACCATGAAAGAAGCCGTCGTCGATGATAGTGATGTTCTCAGAGGACTTTTAGAGTTTGCTAACCGGAATCTCATTCATAGCATCGTACTCGGCGCCTCCACCAAAAACCCTTTGACAAGTCTCAAAAAACTTAAAGCCTATCAGTATCAGGATTTACCCACTACTATGATCAAATCCGCCCCAGATTTCTGCTCTGTCTACATAATTTCCAAATTGAAGATTGTGTCAGCTCGATCAGCTGTGCGCTCATTGTCAAAAACTTCACCCACACCAAAACAAATTTCTATGATGCCATATCCACCTAGTACTGAATCGGAACTTGGATCAGTAAGGGGACAACCACCTAGAAGTAGGAGCACTTACGAAGGAACCGCAGAGTCAATAAGAACACAGGCACGTGAGAGGGCAAGGAGTGCGGGAAGTAACCTGTCAATGGAGAGCGTGGATGTACCGACTCGTGCACGACATTGGTCAATGGATGAAAGAGAAATTGCAGGGCTTGTGGCAATAGATGTGACTAAACCAGATGATGATGTATCGGATACCCTCGGGACGTCAACTCCTCAATCCTCAAAAGAACTTGAAGCTGAGATGAAAAGATTGAGGCTTGAACTGAAACAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAATCAGGCAGAACAGATTCGTCAATGGAAAGTGGAAGAGGACCGTAAGGTTGAATTAGTTAGGTTGTCACAAGAGGCAGCTCTTGCACTGGCAGAAAGGGAGAAGGCTAGAGCCAAAGCTGCAATTGAAGTAGCTGAGGAAGCCAGGGAGAGGGCTGAACAGGAAGCACAGAGAAGAAGGAATGCAGAGATGAAGGCCAAGATGGAGGCAGAAGAGAAGGAACGAGCATTATCGGCGTTGGTTCAAAATGATAAACGGTATAGAAAATACACCATACAGGAAATTGAAGAAGCCACACAAAAGTTCTCCCCATCAAACAAAATTGGTGAAGGTGGATATGGACCGGTGTATAAAGGTCACCTTGATCATACCCCTGTTGCAATCAAAATTTTAAGGCCTGATGCAGTTCAGGGCATGAAGCAGTTCCAGCAAGAGGTTGAGGTACTAAGCTGCATTAGACATCCGCATATGGTCCTCCTCCTTGGTGCATGTCCTGAACATGGGTGCTTGGTGTATGAATACCTGGATCAAGGTAGCTTAGAAGATAGATTATACCGGAAAAATAACAGCAGACCAATTTCATGGAGTAAACGGTTCCAAATAGCCCTTGAGATTGCAACTGCACTCCTCTTCCTTCACCAAAACAAGCCAGAGCCTATTGTACACCGAGACCTTAAACCATCAAACATTCTCTTGGACAAGAATTATGTGAGTAAAATCAGTGATGTTGGTCTAGCACGATTAGTCCCTTCTTCTGTAGCTGATACTGTGACACAATATTATATGACTTCCGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAGCAAACGGGAATACTAACACCAAAGTCAGATATATATTCTCTGGGGATAATGCTACTGCAGATAATCACAGCCAAGCCTCCCATGGGACTTGCTCACCAAGTTAGGAAGGCAATTGAAAGGGGCAGGTTTGAAGAAATTCTTGACCCTGCGATCACTGATTGGCCAGTGGAAGAGGCTCTATCATTTGCCAAATTAGCATTGAGCTGTGCAGAACTCAGCAAGAAGGACAGGCCAAATCTTGCAACAGTTTTGTTGCCAGAGCTTAACAGGTTAAGCGAACTTGAAAATACTTTACACAATGATAGAGTTTCTTTTAGCAGTGATGATGTGAGAAGTAGCCATGCCTCTCGCCCTCCCACACCACCACGAAGTCTACACTCAGGCTCAGATACGTTCTATAAGGTCTAG 2335 0.4527 MSVQQQGGAAALQNITMVAVDKDKNSSYAFRWAVNHLDNPVIIAVHVKHKNFSHHVTNVFPPDEEDVANIFNSLRGMCTRKAVCLPSFLHMHFLYYFLLIIISLVQVTMKEAVVDDSDVLRGLLEFANRNLIHSIVLGASTKNPLTSLKKLKAYQYQDLPTTMIKSAPDFCSVYIISKLKIVSARSAVRSLSKTSPTPKQISMMPYPPSTESELGSVRGQPPRSRSTYEGTAESIRTQARERARSAGSNLSMESVDVPTRARHWSMDEREIAGLVAIDVTKPDDDVSDTLGTSTPQSSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKVEEDRKVELVRLSQEAALALAEREKARAKAAIEVAEEARERAEQEAQRRRNAEMKAKMEAEEKERALSALVQNDKRYRKYTIQEIEEATQKFSPSNKIGEGGYGPVYKGHLDHTPVAIKILRPDAVQGMKQFQQEVEVLSCIRHPHMVLLLGACPEHGCLVYEYLDQGSLEDRLYRKNNSRPISWSKRFQIALEIATALLFLHQNKPEPIVHRDLKPSNILLDKNYVSKISDVGLARLVPSSVADTVTQYYMTSAAGTFCYIDPEYQQTGILTPKSDIYSLGIMLLQIITAKPPMGLAHQVRKAIERGRFEEILDPAITDWPVEEALSFAKLALSCAELSKKDRPNLATVLLPELNRLSELENTLHNDRVSFSSDDVRSSHASRPPTPPRSLHSGSDTFYKV 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01341 742 Coils Coil 298 318 - -
Pste2g01341 742 FunFam Os07g0541700 protein 505 594 - -
Pste2g01341 742 Gene3D Phosphorylase Kinase; domain 1 399 504 - -
Pste2g01341 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Pste2g01341 742 Coils Coil 349 404 - -
Pste2g01341 742 MobiDBLite consensus disorder prediction 716 734 - -
Pste2g01341 742 CDD STK_N 18 178 - -
Pste2g01341 742 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 404 504 - -
Pste2g01341 742 SUPERFAMILY Protein kinase-like (PK-like) 415 691 IPR011009 -
Pste2g01341 742 Gene3D Transferase(Phosphotransferase) domain 1 505 719 - -
Pste2g01341 742 Pfam Protein kinase domain 435 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01341 742 ProSiteProfiles Protein kinase domain profile. 432 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01341 742 MobiDBLite consensus disorder prediction 192 234 - -
Pste2g01341 742 SMART serkin_6 432 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01341 742 MobiDBLite consensus disorder prediction 712 742 - -
Pste2g01341 742 PANTHER OS02G0152300 PROTEIN 16 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01341 Pste-Chr2 14736651 14740625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01341 109 701 Receptor kinase-like Gene Family AT5G12000 57.835 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste2g01341 Pkinase 9.5e-43 CL0016