Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01336 CGACGGTTACAAGAATGTTCCTGCTTCCACTCCTTCAAATCCAAACCATAATCTTAATCATAACAATGCATCAAATCAAACACAACATCACTATTCCTCCATTTTCATTTCCTTTTTCTCTCTAACCATCATTTTCTTTTTTCTTTCTCTCCCATCCAAATTATTTTTTATTTATTTTCCCCTTCCACCTGCATTTTCCTTTTCTTTCGTCTTTTTTTAATCCGATCGATGAACGCAGCTTCCTCCTTTGTGCAATTTTTCGCGTTGAATGTTCTCCTCTATCGGAATTCGGCGTTGGGATTAGCTTAGGGTTTCAGAAAAAGGAAAGTTCTCTCCTTTAAGAATTTTGTTTTTCTTGAATGGAGCCTCGCGTTGGGAATAAGTTTCGGCTTGGCCGTAAGATCGGTAGCGGATCGTTTGGGGAGATCTATTTAGGTACTAATGTTCAAACTAATGAAGAGGTTGCAGTTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGTTATATGAGTCCAAGTTGTACAGAGTTCTCCAGGGAGGAAGTAGTGTCTATTCTCCTGGAATTCCTGATGTTAGATGGTTCGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTCAACTTCTGCAGTAGAAAGCTCTCATTAAAGACTGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTGTTCATTCTAAATCGTTTCTACATCGAGATATCAAACCAGATAATTTCCTCATGGGTTTGGGAAGACGAGCCAACCAGGTTTACAGTATTGATTTTGGTTTGGCAAAGAAATATAGAGATAGTTCAACCCATCAACACATCCCTTACAGGGAAAATAAGAATTTAACTGGGACTGCTAGATATGCGAGTATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTGGAGTCTCTTGGTTATGTCTTGATGTATTTCTTGAGAGGAAGTCTCCCTTGGCAAGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAGAATCAGTGAAAAAAAGGTTTCTACCTCAATTGAGGCCTTGTGTCGAGGTTATCCAACAGAATTCGCATCATACTTCCATTACTGCCGCTCACTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTCGCGACCTGTTTATTCGAGAAGGTTTTCAGTTTGATTATGTTTTTGATTGGACAATCTTGAAGTATCAGCAATCACAGCTTGCAGCTCCTCCAGCACGTGCCATTGGTCCTAATACTGCAACTAGTTCTGCAATGCCACCGGCTGCGACTAATGCTGATAGACAGACAGGAGAGGAAGAAGGGCGACCTCCTGCTCTGATTTCAGGGGATTCCACAAGGCGAAGAATGTCAGGGGCCATGGCGAACACTGTAAATATTTCAAGGCAGAAAAATCAAGTAACCACTGATGCCGCCCTTGATAAGAACGCTATATTGCCAAGGCCCAATGCCTCAGGCCAGACAAGTGGATCAAGGCGAGCAGCTGTTTCTAGTAGCCATGATGCATTTGCTGGTGTTGATTCAGAACTTCGTACTCGTACTACCGACAGTAACCCCGGAACAGCGCGCAAAATATCATCTGGGAGAAATGCTTCTCATGTCAAGAACTATGAAACTGCAGTCAGGGGCATTGAGGGTTTGCAATTAGAAACTGATGAGAGGCCCCATTATTAATTCCTCACCATTTCATGTTGTATATATAAAAATCGAGTTGATGTGTACTGCAATAGTTACATACGTTAAGGTGAGTTGTGTAGGGACGTAGATATGAACTCAGAAAACTGGGCTTGTGTTGCTTAACCCTTGTGCAGTTGTGCTCATACTGATCAACCAGGGAACCTGAAAGAAGTGGAGCTAAATCTCTGATTCTTCTTTCTTTAAAGTTTCGGGTTTACACTGGCACTTGTCTTCTGGCGGGAACCCTAAATTTTGTAATATTTTCCTGTGAGTTGTTATTGTTTTTACCAGATGCTTGAAGTGTCAAGTGGACAACGTTGTTCAAAAATACCAGCAAAAATCTGTTCTCATTTGGATAAGACTGAAGTTTCCAAGATGTGTCTAGACTTCGGAGATTACTGCTGGTATTTAAGAATATTCAAGGTTGTTGAAATTTTTATCAGCTTGAATTACTGTAACTCTTATAGCTTTTCGTTATTACTATGTCGTCATAATATATGTTATCATTTTTATTTCAATATATTTTGGAAGGTTTTGTATGGGAGTAGCCTTTCGGTGCTCCTTATTTGTGCAAAG 2324 0.4036 MEPRVGNKFRLGRKIGSGSFGEIYLGTNVQTNEEVAVKLENVKTKHPQLLYESKLYRVLQGGSSVYSPGIPDVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYSIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPPARAIGPNTATSSAMPPAATNADRQTGEEEGRPPALISGDSTRRRMSGAMANTVNISRQKNQVTTDAALDKNAILPRPNASGQTSGSRRAAVSSSHDAFAGVDSELRTRTTDSNPGTARKISSGRNASHVKNYETAVRGIEGLQLETDERPHY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01336 461 ProSiteProfiles Protein kinase domain profile. 9 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01336 461 Pfam Protein kinase domain 10 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01336 461 MobiDBLite consensus disorder prediction 414 438 - -
Pste2g01336 461 CDD STKc_CK1_delta_epsilon 8 287 - -
Pste2g01336 461 MobiDBLite consensus disorder prediction 385 400 - -
Pste2g01336 461 MobiDBLite consensus disorder prediction 311 354 - -
Pste2g01336 461 SMART serkin_6 9 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01336 461 MobiDBLite consensus disorder prediction 379 441 - -
Pste2g01336 461 SUPERFAMILY Protein kinase-like (PK-like) 5 295 IPR011009 -
Pste2g01336 461 PANTHER CASEIN KINASE-RELATED 9 364 - -
Pste2g01336 461 FunFam Putative Casein kinase I 1 90 - -
Pste2g01336 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pste2g01336 461 Gene3D Transferase(Phosphotransferase) domain 1 1 338 - -
Pste2g01336 461 FunFam Casein kinase I isoform delta-like 1 313 - -
Pste2g01336 461 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pste2g01336 461 MobiDBLite consensus disorder prediction 314 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01336 Pste-Chr2 14693199 14700787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01336 7 228 EF-hand Containing Proteins AT2G17890 25.000 4.37e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pste2g01336 Pkinase 5e-25 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01336 2 14693199 14700787 Pste2g01336 2 14693199 14700787 ECH
Pste6g03644 6 25591854 25599021 Pste2g01336 2 14693199 14700787 PCT