Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01334 TTGTTTATTACAATTATTCATGGGCTGGAGCCGAAGAACCGTGGTTTCTCAAATCTGAAGGCGGTTGACCCATGCGCGTTGACTGGGTGCAAAGTAAGTGGGGGTTCCCACTCACTTTCGCAAAAACGCATTGTGCTCTCTTTCCGCGGCGTAGATCTGAGCAGTTTGGGAAACCCTAACTGCTCTCACCAACGACCTCATCACTCTCTTCGCTTTGCTTTTTTCTCCTCCGATCAACGCCCTAAGATAGAATTAATTATGAAGTATAACGTCATGGCAGGACTTGCACCTGAGGGATCACAGTTTGATGGTCGTCAGTATGATAACAAGATGAATGAGTTGCTTACAGCAGATGGACAGGACTTCTTCACATCTTATGATGAAGTTTACGAGAGTTTTGATGCTATGGGCCTGCAAGAGAATCTCCTGAGAGGAATTTATGCATATGGTTTTGAGAAGCCATCAGCTATTCAGCAAAGGGGAATAGTTCCATTCTGCAAGGGACTAGATGTGATACAACAAGCTCAGTCTGGAACAGGGAAGACTGCTACTTTTTGCTCTGGAATTTTGCAGCAACTTGACTATAATGTGACAGAATGCCAAGCCTTGGTTTTAGCACCAACTCGAGAGCTTGCTCAGCAGATTGAAAAGGTTATGCGGGCGCTTGGAGATTATCTTGGTGTGAAGGTACATGCATGTGTGGGAGGTACCAGTGTTCGTGAAGACCAACGCATTCTATCAAGTGGTGTGCATGTTGTTGTTGGTACTCCTGGTCGTGTATTTGATATGCTGCGCAGACAGTCACTTCGGCCAGATCACATCAAGATGTTTGTATTGGATGAGGCTGATGAAATGCTTTCCCGTGGTTTTAAAGACCAGATCTATGACATATTCCAGCTGCTTCCAACTAAGATTCAAGTGGGAGTTTTCTCTGCTACAATGCCCCCTGAGGCACTGGAGATCACGAGGAAGTTTATGAACAAACCTGTGAGGATCCTTGTGAAACGTGATGAGCTCACCCTGGAGGGTATCAAGCAATTTTATGTCAATGTTGAGAAGGAGGAATGGAAGCTTGATACACTTTGTGATCTTTATGAGACATTGGCAATTACTCAGAGTGTCATTTTTGTGAACACCAGAAGAAAGGTTGATTGGCTGACAGACAAGATGCGAAGCCGAGACCACACAGTCTCTGCAACCCATGGAGACATGGACCAGAATACCAGGGACATTATTATGCGTGAATTCCGTTCTGGATCTTCCCGTGTTTTAATAACTACTGATCTTTTGGCCCGTGGTATTGATGTTCAGCAAGTGTCTTTAGTTATAAATTATGATCTCCCAACACAGCCTGAGAACTATCTCCATCGAATTGGACGTAGTGGGAGGTTTGGTAGGAAAGGTGTTGCCATCAACTTTGTCACAAAAGATGATGAAAAAATGCTGTTTGACATCCAGAAGTTTTACAATGTGGTAATTGAGGAGCTGCCTTCAAATGTTGCCGAACTCCTTTGATGAGTTTTTTTGTTCCATCATATTTGAGGAAAGTTGGTTGCTGAGGTAAGTGTTATGTAATGTTTCTTTTCCTTTTTGCCCCTTTTGTTGTATTGCTGCTCTTAAACCTTGTTTGACTTTTTTAATAGGCGTAGTAATTTAATTTACATTGTCAGTCTTCTTAATGTTCCAAGTACTTGCAATGTGGAATCGCATTACTGTCCGAATTGGTGTATTGGTAGTTGTTGCACTTTTCTAACAACCAAGGTTTTCAATATACGTTTTGGTTATTCTAACATACGATGAGATAATTTGATATTTTCAATGTATTCTAAGTTGATCCAATGGCATGGCACTTGAAACATCGAGGTGGTGTGCTGTGGTACTCATTTTTTGAGGTTCAAGGGTTACATTTTATGCTTTTTAGGGAACATTTCATATTCTTGGTTGCTTCATGGTTTCCCCAATTTGAAAATGGAATTGATAGTGAAACTGGTCATTGGTGTATCGTGCTTGTAGTGATTATTGCTGCTATCCCGATTGAAATAACCATCAGCTTCTATTATTCAATGTTCGAAGGTTGGGAGGACCGTTGCGAGGCGCAAGATAAGATTGTGGTTATCTACTTTTCATAAAATTGCTAATGGATTGCAATAATCGTATATCTCGCTGAATTATCAGTCAGAGGTTTTGTCTGGTTGTCACAATGTTGTAAGCATTGATGGAGCACGTAGTTACTTTTACGACCATCGTGATGTGATATGAAATTGTAAGATGCTAAAAATCATGATGTTTGACTCTTGAACTACTTAAGTAACTTGAAATACTGTGTTGGTTATCAAAAGGTGTCAATGAGGTGATTTTTGTTGCCATTTATTTTTCTGTAATTAGTAATTACAACCTCTAATAATGTATCATTATTTTTTGGAACTAAATGTCAAATGCACTCGTATATTAAGTATTCCA 2460 0.4049 LFITIIHGLEPKNRGFSNLKAVDPCALTGCKVSGGSHSLSQKRIVLSFRGVDLSSLGNPNCSHQRPHHSLRFAFFSSDQRPKIELIMKYNVMAGLAPEGSQFDGRQYDNKMNELLTADGQDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPTKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDEKMLFDIQKFYNVVIEELPSNVAELL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01334 504 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 162 332 IPR014001 -
Pste2g01334 504 Gene3D - 121 339 IPR027417 -
Pste2g01334 504 CDD DEADc_EIF4A 135 333 - -
Pste2g01334 504 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 343 504 IPR001650 -
Pste2g01334 504 Pfam DEAD/DEAH box helicase 156 317 IPR011545 GO:0003676|GO:0005524
Pste2g01334 504 Pfam Helicase conserved C-terminal domain 357 465 IPR001650 -
Pste2g01334 504 SMART ultradead3 150 347 IPR014001 -
Pste2g01334 504 PANTHER RNA HELICASE 111 488 - -
Pste2g01334 504 FunFam Eukaryotic initiation factor 4A-III 339 504 - -
Pste2g01334 504 Gene3D - 340 504 IPR027417 -
Pste2g01334 504 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 131 159 IPR014014 GO:0003724
Pste2g01334 504 SMART helicmild6 384 465 IPR001650 -
Pste2g01334 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 485 IPR027417 -
Pste2g01334 504 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 278 286 IPR000629 -
Pste2g01334 504 CDD SF2_C_DEAD 344 474 - -
Pste2g01334 504 FunFam Eukaryotic initiation factor 4A-II 119 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01334 Pste-Chr2 14673496 14677597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01334 92 504 Eukaryotic Initiation Factors Gene Family AT1G72730 87.681 0.0 761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03639 6 25546626 25549590 Pste2g01334 2 14673496 14677597 PCT