Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01313 ATGCAGAGAGTGGGTACACGCACTGACAGTGGCAGTGGAAAAAGGAAAATGGAGGGAGTTGTGGTGAAAGAAGAAGAATCAATGATGTTTGCAGACGCAGCTTCAGTTCCAACCTCTTCAAACCTCTCCCCACGACCAAGGGAAGGGTTGCACGATGTGGGTACCCCTCCGTTTCTCACTAAGACATTTGAAGTGGTGGAAGACCCTTCCACCGACGACATCGTTTCGTGGAGCAGAGCCCGCAACAGCTTCGTCGTTTGGGACTCTAACAAGTTCTCCACCACCATTCTCCCTCGCTATTTCAAGCACAACAATTTCTCCAGCTTCGTCCGACAACTCAACACTTACGGTTTTAGAAAAGTTGACCCGGATAAATGGGAATTTGCGAACCAAGGGTTTTTGGCGGGGCAGAGGCACTTGTTGAAGACGATCAAGAGAAGGAGGCACGTGACGCAGACACAGACACAGTCACACGAGGGAGGAGGTGGGGTTTGTGTTGAACTTGGGGAGTTTGGGTTGGAAGGTGAGATTGAGAGGTTGAGGAGAGACAGGACAGTGTTGATGGCTGAAATTGTGAGGTTGAGGCAGCAACAGCACAACTCGAGGGAGCAAGTGTTGGCAATGGAAACTAGATTGCAAGCCACTGAGAAGAAACATCAACAGATGATGGCTTTTCTTGCCAAAGCACTCAACAACCAGGCTTTTATTCAGCAGTTCCTCCAGAGGAATGCTCAGAGCAAAAGACAAGATCCGGTGATCGATGATCATGTGTCTGTGGCAAATCAAGAAGGATCGGCGGCTACTATTGAGTCACACATGGAATCTCTTTTATCTGCTACTTGTGATGATGAATTAAGCAGTGAAATTGAGGATCCAATGTTGAGTTCGGTTGCAACAGCTAGTGGGACCAATTTGGGTGCTGTGCTTTGGGAGGACTTGCTGGGACAGGACCTCGACCTGGTTGCTGGGAACCCTCAGGAGGAAGTTGGGATTGGTGATTTTTCACAAGTTGACGTTCCTGCGGAGGATTTGGTTGCACAATCTGATGAGTGGGCAAGGAGACAGGGTTGCTGCACAAGAGGTCGACAGATATTGCTCTCTATCTGTATCCTTTGTAAACAGACAGGTGTTGTGACCTGCAGAGTATTCTTTGTGCCAATAAGAATTTTATTTTTAATCTGTAGCTGCCCTGTTTATAACTGCATTATACGTTTTTGCAGGGTCCATCAAAAGCAGATATTCAATGTGCTGATTATTGACTGGGAAAAGTAGTATTTTAACTATAAGGTGTGTATGATATTACTTGAGACGAATTCTGTATTATGATATACAGACCTCGATTCATGTACAACTTTGTATTAGTTAATTTGGATTTGTATTACAAAACGTTTTTATAATCTAAATTCCTTAATCTTTTTCATCTGAATTGGTTTATATAGACAAATTAATTGCAAAATAAAACAAAATGAATAGAACACTTATGGATAATTGTCT 1494 0.4398 MQRVGTRTDSGSGKRKMEGVVVKEEESMMFADAASVPTSSNLSPRPREGLHDVGTPPFLTKTFEVVEDPSTDDIVSWSRARNSFVVWDSNKFSTTILPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANQGFLAGQRHLLKTIKRRRHVTQTQTQSHEGGGGVCVELGEFGLEGEIERLRRDRTVLMAEIVRLRQQQHNSREQVLAMETRLQATEKKHQQMMAFLAKALNNQAFIQQFLQRNAQSKRQDPVIDDHVSVANQEGSAATIESHMESLLSATCDDELSSEIEDPMLSSVATASGTNLGAVLWEDLLGQDLDLVAGNPQEEVGIGDFSQVDVPAEDLVAQSDEWARRQGCCTRGRQILLSICILCKQTGVVTCRVFFVPIRILFLICSCPVYNCIIRFCRVHQKQIFNVLIIDWEK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01313 423 MobiDBLite consensus disorder prediction 33 54 - -
Pste2g01313 423 Pfam HSF-type DNA-binding 58 147 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01313 423 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01313 423 PRINTS Heat shock factor (HSF) domain signature 109 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01313 423 PRINTS Heat shock factor (HSF) domain signature 58 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01313 423 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 44 271 IPR027725 -
Pste2g01313 423 Gene3D - 51 148 IPR036388 -
Pste2g01313 423 SUPERFAMILY "Winged helix" DNA-binding domain 55 147 IPR036390 -
Pste2g01313 423 Coils Coil 177 197 - -
Pste2g01313 423 SMART hsfneu3 54 147 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g01313 423 FunFam Heat shock transcription factor 1 51 148 - -
Pste2g01313 423 ProSitePatterns HSF-type DNA-binding domain signature. 97 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01313 Pste-Chr2 14470516 14472548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01313 44 351 HSF AT2G26150 51.948 1.28e-104 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste2g01313 HSF_DNA-bind 2.9e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01313 2 14470516 14472548 Pste2g01313 2 14470516 14472548 ECH
Pste8g00499 8 2595415 2600261 Pste2g01313 2 14470516 14472548 PCT