LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g01293	ATGGAGGAAACAGGAGGCGTAGCACCCAATAAAGTTACCGAGAACGAGATTGTTGTACGAATTGCAAACACCGAAGAAACAATCTCAAAGAAGGAGCAAAGGCATTCTAAAAGTTTCTCAGCAGCTGAAAGCAGTTCCCTCTCTTTTAAAGGGTTCGGAGATTCACAAGTTGAACTCGCTGAGTTTGACAATCTAAGAAACAAGGGTCAGGCTTCAACAATGTCGGTGACACCTACGAAGAAGTTGATGGGTCGGTCGGAATTTCCGAAGCCAAAGTCCAGACTGGTGGAACCACAGTATAAAAAATATGCAAACTTTGTTGAACAAGATGCAAGAAATTCTCCTAAGAATATTGCAGTTCATGCAGCAAGGGATGCTCCCGAAGAAACAAGTGTTGTTAACCGAAGAACCGGGACTCCAGGGGAAGAAGAAGAAGAAGATGATGAAGATGACGAAGTGTACAAGATTGCACATATTGAAGTGAGTAAGAAATCTGGTATGAAGTGGAGAGTATTGTTTTTTGTTGAGTTGATTGCCTTTGTTTGCATCACGGGGGTTTTGATTGCAAGCTTAACTGTTCATGAGTTGCAACATAAGGAAATTTTTGGTTTGGAATTGTGGAAATGGTGTGTGTTGGCATTGTCTATAATATGTGGAAGACTGGTCACTGAGTGGTTTATCAATCTTTTGGTTTTCCTGATTGCGAGGAACTTCTTGTTTAAGAAAAAGGTTTTGTATTTTATTTTTGGTGTGAAAAATAGCGTTCAGTTCTTCGTATGGCTATGTTTGATTCTCTTGGCATGGGGTCTTCTTTTCAACCGTGGAGAGACAAGAAGCCCAGAGGTTACTACGATTCTTAATTACATTACATGGGCCCTTGTTTCTTTTGTTGTTGGAGCAGGTATATGGTTAATAAAAACATTCTTGATAAAGCTGTTGGCTTCAAAATTTCAATCTGCTAGATTTTTTAACCGGATTCAAGAATCAATCTTTCATCAATACATTTTGACAACTCTCTCGGGTCCTCCCTTGATGGAGAGTGCTGAACAAGAAGGCAAGATTTCGCGTAGTGGCCAACTCAGTTTTAAAACCATGGTAAATGAGAATAAAAGGGAGAAAGAACAAGTCATTGATGTAGACAAACTCAAGAAGATGAAACAAGAGAAAGTTTCTGCTTGGACTATGAAAGGATTGATTTATGTGATAAGCACTTCTGGCTTGTCAACCATCTCCTATACACCGGAGAGTGACCTCAAAGATAATGAAATTACTAGTGAGTGGAAAGCAAAGGCAGCTGCTTATAGAATTTTTTCGAATGTAGCCAAGCCAGGAAAAGACTATATTGAGAAGGATGACCTATTGCGATTCATGAAACATGAAGAAGTGGAACATGTGTTTTCACTATTCGAAGGGGCAGTTGAGACTGGAAGAATTAAGAGGAAATGTCTGAAGAACTGGCTGGAACCAATTTCTTTCCCTTTTGCCGCAGTGAAACATCTGGAACATGTGGAGTTGATGCACTCAAATAGATTTGTTAAATTCAAAACCCTTATCCAAGCATATATATATCAAATTTTCTTTCAAGGCATGCATATGTTTGTTTCCAGCTGTCAAGTTATTACTCATAATGCCACAAGCATGATGCTCACATATTATTCATGTTTGCAGGTGGATGTCTACTTTGGGCGCCAATCACTTATACATTCACTACATGATACCAAAACAGCCGTTGCCGACTTAAATGTGCTTGCTTCTGTATTTGTGATTATTCTTATCATTATTGTGTTCCTTCTTATAATGGGTCTCTTAACAACTCATGCACTTGTTGTTATTATATCACAGCTCGTAGTTGTGGCTTTTGTTTTTGGCAACACAGCTAAAACTGTATTTGAATCTATTATATTTGTTTTTGCAATGCACCCATTTGATGTTGGTGATCGCTGTGTCATTGATGGTGTTCAGATGGTTGTGGAAGAGATGAAAATGCTAAATACGGTCTTTTTGAGACTTAACAATGAGAAGATTTTCTATCCTAATTCAGTTCTGGCAACCAAGCCAATCAGTAACTACTACAGGAGTCCCGAAATGGGTGATTGTATTGAATTTGATGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAGGGCAAGCATAAAAGCATATTTGGAGAGTATGCCTCAACACTGGCGTCCCAATCACAGTGTGGTGGTTCAGGATATTGAGAATGGTCATAAGATGGAAATGGCTCTATATGTAACTCACACCATAAATTTTCATAATTATGATGATAAGAGACGCCGAAGATCTGAATTAATTCTGGAGTTAAAGACAATGCTTCAAGATCTTAATATTAAATATCATCTGCCGCCACAAGAAGTTCGTCTCAGTCACGTAAAGTCAGAAGACTCAACGACACAAACATTGTGAAGATAGCCTCCATAATTTGATGTGTAGCACTTCGGTTCTAGTCTACTAGACTAAGTTTTCCTTGTGGTATTCAGTCTGGCATCAAATATATATGATAGATTGATCGTTTACTTTCTAGGAAAATAGAGAAATTGGTTTGTGCACTCAATGTTTCCCTATCAATTACCTAAGACCAAGAAAGAAAGATAAAGTTTAATGGCATTGTTCTGAGGAGTAACAAAGATCTCTCCAAGAGCTTTTGAAACAACAAAAATTGTGTTGTCTTTGTACTCTAGCGGAGGTGTCGATTATTGCACAAAGAAGCCAAGTTGCCAAATCTATAATCTTTTTCTTTTGTTGTTGAATAAATCTATTATCC	2791	0.3802	MEETGGVAPNKVTENEIVVRIANTEETISKKEQRHSKSFSAAESSSLSFKGFGDSQVELAEFDNLRNKGQASTMSVTPTKKLMGRSEFPKPKSRLVEPQYKKYANFVEQDARNSPKNIAVHAARDAPEETSVVNRRTGTPGEEEEEDDEDDEVYKIAHIEVSKKSGMKWRVLFFVELIAFVCITGVLIASLTVHELQHKEIFGLELWKWCVLALSIICGRLVTEWFINLLVFLIARNFLFKKKVLYFIFGVKNSVQFFVWLCLILLAWGLLFNRGETRSPEVTTILNYITWALVSFVVGAGIWLIKTFLIKLLASKFQSARFFNRIQESIFHQYILTTLSGPPLMESAEQEGKISRSGQLSFKTMVNENKREKEQVIDVDKLKKMKQEKVSAWTMKGLIYVISTSGLSTISYTPESDLKDNEITSEWKAKAAAYRIFSNVAKPGKDYIEKDDLLRFMKHEEVEHVFSLFEGAVETGRIKRKCLKNWLEPISFPFAAVKHLEHVELMHSNRFVKFKTLIQAYIYQIFFQGMHMFVSSCQVITHNATSMMLTYYSCLQVDVYFGRQSLIHSLHDTKTAVADLNVLASVFVIILIIIVFLLIMGLLTTHALVVIISQLVVVAFVFGNTAKTVFESIIFVFAMHPFDVGDRCVIDGVQMVVEEMKMLNTVFLRLNNEKIFYPNSVLATKPISNYYRSPEMGDCIEFDVDVSTSIESIGALRASIKAYLESMPQHWRPNHSVVVQDIENGHKMEMALYVTHTINFHNYDDKRRRRSELILELKTMLQDLNIKYHLPPQEVRLSHVKSEDSTTQTL	810

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g01293	810	Gene3D	-	641	690	IPR023408	-
	Pste2g01293	810	Pfam	Mechanosensitive ion channel	584	787	IPR006685	GO:0016020\|GO:0055085
	Pste2g01293	810	PANTHER	MECHANOSENSITIVE ION CHANNEL PROTEIN 5	19	802	IPR016688	-
	Pste2g01293	810	MobiDBLite	consensus disorder prediction	122	149	-	-
	Pste2g01293	810	SUPERFAMILY	Sm-like ribonucleoproteins	631	690	IPR010920	-
	Pste2g01293	810	FunFam	Predicted mechanosensitive ion channel	641	690	-	-
	Pste2g01293	810	PIRSF	Memb_At2g17000	4	499	IPR016688	-
	Pste2g01293	810	PIRSF	Memb_At2g17000	554	810	IPR016688	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g01293	Pste-Chr2	14225361	14228965	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g01293	23	807	Mechanosensitive Ion Channel Family	AT1G53470	33.774	7.41e-130	407