Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01289 TACAAAGAGGTTGATGGGTCGGTCGGAATTTCCGAAGCCAAAGTCCAGAATGGTGGAACCACAGTATCCAAAAGATGCAAACTATGTTGAAGAAGATGCTCGAGTGACAAGTTCCAATTCATTTGCAAGAAATTCTCCTAAAAAGAATGTTAGGGATGCTCCTGAAGGAACAACTATTGTTAACCGAAAAACCCCCCTGCTTGGGACTCCAGGGGAAGAAGAAGATGAAGATGAGGAAGTGTACAAGATTGCTCATATTGAAGTGAGCAAGAAATCTGGTATGAAGTGGAGAGTATGGGTTTTTGTTGAGTTGTTTGCATTTGTTTGCATCATGGCTGTTTTGATTTCAAGCTTGGCAGTTGATGAGTTGCAACATTGGGAATTGAGTGGTTTAGAATTGTGGAAATGGTGTGTGTTGGCATTGACTATAATATGTGGTAGACTGTTCACTGAGTGGTTTATCAATGGTTTGGTTTTCCTGATTGCGAGGAACTTTTTGTTTAAGAAAAAGGTTTTGTATTTTATTTTTGGTGTGAAGGATAGCGTTCAGGGCTTTATATGGCTGTGTTTGGTTCTTGTGACATGGGGTCTGCTTATCAAACGTGAACTGAAGAGAAGCAAAAAGGTTACTATGGATCTTAATTACATTACAAAGGCCCTTGCTTCTTGTGTTATTGGAGCAGGTATCTGGTTAATAAAAACATTCTTGATAAAGCTGTTGGCTTCAAAATTTCAATCTATTAGATTTTTTAACCGGATTCAAGAATCAATCTTTCATCAATACATTCTGAGGACTCTCTCAGGTCCTCCCTTGATGGAGAGTTCTGAACAAGTAGGCAAGATTTCACATAGTGGCCAACTCAGTTTTAAAACCATGATTAGTGATAATGGAAGGGAGGAAGAAAATGTCATTGATGTAGACAAGCTCAACAGGATCAAACAAGAGAGAGTTTCTGCTCAGACTATGAAAGGATTGATTCACATCATAAGGAGTTCTGGGTTGTATACCATCTCCTCTACACCGGAGAGTGACCTCAAAGATAATGAAATTAATAGCGAGTGGAAAGCAAAGGCAGCTGCATATAGAATTTTTGCGAATGTAGCCAAGCCAGGAAACGAGTATATTGAGAAGGATGACCTATTGCGATTCATGAATCATGAAGAAGTGGAAAATGTGTTTCCACTATTTGAAGGGGCACTTGAGACTGGAAGAATTAAGAGGAAGTCTCTCAAGAACTGGCTGGTGAAGGTCTACCTTGGACGCCAATCACTTGTACATTCACTACATGATACCAACACAGCCATTGCCAACTTAAATATGCTTGCTTCTATATTTGTGATTATTTTGATGACTATTTTGTTCTTTCTTATAATGGGTTTCTTAACAACTGAAATTCTCGTTGTTATTACATCCCAACTTTTAGCTCTGGCTTTCATGTTTGAAAACACAGCTAAAACTGTGTTTGAAGCTATTATATTTGTTTTTGCAATGCACCCATATGATGTTGGAGATCGCTGTGTCATTGATGGTGTTCAGATGGTTGTGGAAGAGATGAACATACTATCTACAGTCTTTTTGAGATATGACAATGAAAAGATTTTCTATCCTAATTCAGTTCTGAAAACCAAGCCAATCAGTAACTACTACAGGAGTCCAGAAATGGGTGATTCAATTCAATTTGCAATTGATGTTTCTACTTCTATTGAAAGTATTGGAGGTTTAAAGACGAAGTTAAAAGCATATTTGGAGAGTAGGCCTCAACACTGGCGTCCCCACCACAGCGTTGTGGTTGAGGATATTGAGAATGGTCATAAGCTGGAAATGGTTCTATATGTTACTCACACCATAAATTTTAATAACTATGATGATAAGAGACGCCGAAGATCTGAATTAATACTGGAGGTAAAGAAAATTCTGGAAGATCTTAATGTTGCATATAATTTGCCGCCACAAGAAGTTCGTCTCAGTTATACAAGATCAGAAGACTCAATGACACAAACATTATTGGATTTTGTCAACTACACACAGCCTTATTTCCCTTCCACCATGCACGTTTCACATTTTCAAACATCTTTATCAGATGGATTTTCTCAATTCACCTCCATGCATTTTTTCACCCTTCATTCTTTCCACTTCAAATTCACATACCAACCAATCAACATTTTCGGCATTCTGAGAAAGTTTCAGACTTTCCGGGAAATTGACCCTGCTACTAGTTTCTGCTTCAACACAGCTCAAAATTGTTTCCCTGTCATGGAAGAAGAAAGAGGCGTGGCAAACCAGAAAGTGACAAAGAACGAGGTTGTTCTGCGCATTTCAGATACCGAAGAAGAAGTAATGTACGCAAAGAAGGAGCAAAAGAATTTTACATATTTCCCAGTAGCTGATAGCAGTTCCCTCTCTCATAAAGGGTTTGGAGATTCAGAAGTTGAACTCGCACAGTTTGAGAATCTAACAAACAAGGGTCAAGTTTCCACAGAGCAGGTGACAACTACGGAGAGTTTGATGGGTCGGTCGGAACCAACGCGTCCAAAAGATGCAAACTTTGTTGAAGAAGATGCTCAAACGACAAGTTCCAATTCATCTGCAAGTAGTTCTCCTAACAAGAATGTTGCATCTCGTGCTGCAAGGGATGCTCCTGAAGCAACAACTGTTGTTAACAGAAAAACCCCCTTGATCGGGACTCAGGGAAAAGAAGAAGAAGATGATGATGATGATGATGAAGAGGTTTACAAGATTGCACATATTGAAATGAGCAAGAAATATAGTAAGAAGAGGAAAGTTTTGTTTTTTATTGAGTTGTTTGCTTTTGTTTGTATCATGTGTTTTTTGATTGCAAGCTTAACGGTTCATGAGTTGCAACATATGGGCATTTGGGGTTTGGAACTGTGGAAATGGGGTGTGTTTGTATTGGTTATACTGTGTGGTAGACTGGTCACCGGGTGGTTTATCAATTTTTTGGTTTTCTTGATTGAGAGGAACTTCTTGTTTAAGAAGAAGGTTTTGTATTTTGTGTATGGTGTGAAGAAGAGTGTTCAGACCTTTATATGGCTAAGTTTGGTTCTTTTGACATGGGGTTTGCTTATCAAACGTGGACTGAAGAGAAGCCAAGAGGTTACTACTATTCTTAATTACATTACTAAGACCCTAGGTATGTGGTTAATAAAAGCATTTGTGATAAAGCTGTTGGCTTCAAAATTTCAAACTAGTAGATTTTTTAATAGGATTCAAGAATCAATCTTTCACCAATACATTTTGAAGACTCTCTCGGGTCCTCCTTTGATGGAGATGGCTGAAAAAGTAGGCAAGACTTCGCGTGGTGGCCACCTCAATCTCAAAACAATTAATGAAAGTGAAGGGGAGGAAGAAGAAGTTATTGATGTAGATAAGCTCAAGAAGATGAAACAAGAGAAAGTTTCTGCTCGGACTATGAAAGGATTGATTCATGTCATAAAGAGTTCTGGTTTGTCTACCATCTCCTCTTCAGCAGACAGTGACCACAAGGATAATGAAATTACTAGTGAGTGGAAAGCAAAGGCAGCTGCATATAGAATTTTTGCAAATGTAGCCAAGCCAGGAAACGAGTATATTGAAAAGGATGACCTGTTGCGATTCATGAAAAAGGAAGAAGTGGAAAATGTGTTTCCACTATTTGAAGGGGCACTTGAGACCGGAAGAATTAATAGGAAGTCTCTGAAGAACTGGCTGGTGAAAGTCTACCTTGGACGCCAATCACTTGTACATTCACTACATGATACCAACACAGCTGTTGGCGACTTAAATGTGCTTGTTTCTGTTAATGTGGTTATTCTGATAATTATCGTGTGGCTTCTTTTAATGGGTTTTTTATCAACTCAACTTCTTGTTGTTATTGTAACCCAGATTACAGCTTTGGCTTTCATGTTTGGAAACACAGCTAAAACTGTATTTGAATCTATTGTTTTTCTTTTTGCAATGCACCCATTTGATATTGGTGATCGCTGCGTCATTGATGGTGTTCAGTTGGTTGTGGAAGAGATGAGCATACTATCTACTGTCTTTTTGAAACTTGACAATGAAAAGATTTTCTATCCAAATTCAGTTCTGGCAACCAAGCCAATCAGTAACTACTACAGGAGTCCAGAAATGGGTGATTCAGTTAAATTTGCTGTGGATCTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGGCAAAGATAAAAGCATATTTGGAGAGTATGCCTCAACACTGGCGTCCCAACCACACTTTGGTGGTTGAGGACATTGAGAATGGTCACAAGATGGAAATGGTTCTATATTTTACTCACACCATAAATTTTCAGAAGTACAATGATAAGAGGCGTCGGAGATCTGAATTAATCCTGGAGTTAAAGAAAATTCTTGAAGATCTTAATATTAAATATCATCTGCAACCACAAGAAGTTCGTCTTAGTTATGTAAGGTCAGAAGACTCAAGTCACTCAACGGCACAAACATTGTGAGACCTTTCATAATTTGATGATGTATCCTTTTATATGTTGCAAATCTATATATCAGGTTTTTTGGGGTATTCTTTTGTTCTTGATTATTGTTTTCATAACCTCCTCTCCGTGGGACCCAACATGATATGTGC 4614 0.383 MGRSEFPKPKSRMVEPQYPKDANYVEEDARVTSSNSFARNSPKKNVRDAPEGTTIVNRKTPLLGTPGEEEDEDEEVYKIAHIEVSKKSGMKWRVWVFVELFAFVCIMAVLISSLAVDELQHWELSGLELWKWCVLALTIICGRLFTEWFINGLVFLIARNFLFKKKVLYFIFGVKDSVQGFIWLCLVLVTWGLLIKRELKRSKKVTMDLNYITKALASCVIGAGIWLIKTFLIKLLASKFQSIRFFNRIQESIFHQYILRTLSGPPLMESSEQVGKISHSGQLSFKTMISDNGREEENVIDVDKLNRIKQERVSAQTMKGLIHIIRSSGLYTISSTPESDLKDNEINSEWKAKAAAYRIFANVAKPGNEYIEKDDLLRFMNHEEVENVFPLFEGALETGRIKRKSLKNWLVKVYLGRQSLVHSLHDTNTAIANLNMLASIFVIILMTILFFLIMGFLTTEILVVITSQLLALAFMFENTAKTVFEAIIFVFAMHPYDVGDRCVIDGVQMVVEEMNILSTVFLRYDNEKIFYPNSVLKTKPISNYYRSPEMGDSIQFAIDVSTSIESIGGLKTKLKAYLESRPQHWRPHHSVVVEDIENGHKLEMVLYVTHTINFNNYDDKRRRRSELILEVKKILEDLNVAYNLPPQEVRLSYTRSEDSMTQTLLDFVNYTQPYFPSTMHVSHFQTSLSDGFSQFTSMHFFTLHSFHFKFTYQPINIFGILRKFQTFREIDPATSFCFNTAQNCFPVMEEERGVANQKVTKNEVVLRISDTEEEVMYAKKEQKNFTYFPVADSSSLSHKGFGDSEVELAQFENLTNKGQVSTEQVTTTESLMGRSEPTRPKDANFVEEDAQTTSSNSSASSSPNKNVASRAARDAPEATTVVNRKTPLIGTQGKEEEDDDDDDEEVYKIAHIEMSKKYSKKRKVLFFIELFAFVCIMCFLIASLTVHELQHMGIWGLELWKWGVFVLVILCGRLVTGWFINFLVFLIERNFLFKKKVLYFVYGVKKSVQTFIWLSLVLLTWGLLIKRGLKRSQEVTTILNYITKTLGMWLIKAFVIKLLASKFQTSRFFNRIQESIFHQYILKTLSGPPLMEMAEKVGKTSRGGHLNLKTINESEGEEEEVIDVDKLKKMKQEKVSARTMKGLIHVIKSSGLSTISSSADSDHKDNEITSEWKAKAAAYRIFANVAKPGNEYIEKDDLLRFMKKEEVENVFPLFEGALETGRINRKSLKNWLVKVYLGRQSLVHSLHDTNTAVGDLNVLVSVNVVILIIIVWLLLMGFLSTQLLVVIVTQITALAFMFGNTAKTVFESIVFLFAMHPFDIGDRCVIDGVQLVVEEMSILSTVFLKLDNEKIFYPNSVLATKPISNYYRSPEMGDSVKFAVDLSTSIESIGALKAKIKAYLESMPQHWRPNHTLVVEDIENGHKMEMVLYFTHTINFQKYNDKRRRRSELILELKKILEDLNIKYHLQPQEVRLSYVRSEDSSHSTAQTL 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01289 1489 SUPERFAMILY Sm-like ribonucleoproteins 1307 1366 IPR010920 -
Pste2g01289 1489 MobiDBLite consensus disorder prediction 819 834 - -
Pste2g01289 1489 MobiDBLite consensus disorder prediction 1 52 - -
Pste2g01289 1489 MobiDBLite consensus disorder prediction 819 902 - -
Pste2g01289 1489 SUPERFAMILY Sm-like ribonucleoproteins 485 544 IPR010920 -
Pste2g01289 1489 FunFam Predicted mechanosensitive ion channel 1317 1366 - -
Pste2g01289 1489 Pfam Mechanosensitive ion channel 437 639 IPR006685 GO:0016020|GO:0055085
Pste2g01289 1489 Pfam Mechanosensitive ion channel 1260 1463 IPR006685 GO:0016020|GO:0055085
Pste2g01289 1489 Gene3D - 495 544 IPR023408 -
Pste2g01289 1489 Gene3D - 1317 1366 IPR023408 -
Pste2g01289 1489 MobiDBLite consensus disorder prediction 28 42 - -
Pste2g01289 1489 MobiDBLite consensus disorder prediction 847 868 - -
Pste2g01289 1489 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 755 1477 IPR016688 -
Pste2g01289 1489 FunFam Predicted mechanosensitive ion channel 495 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01289 Pste-Chr2 14199961 14210594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01289 2 652 Mechanosensitive Ion Channel Family AT5G12080 48.416 0.0 648