Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01284 ATGTTGATGGAGAGTGATATGTACATTGCTCCACTGGACATTTCTGGCCGAGATGCTACAGTAATAATAGATGAAATCTCCCAAAATTCCACCCCAAATCCTCTCATTCAGTGCTATTCACTTGACCTTAACAACCAATCCCACATCATAAATGAAATTTCTATGCTTTCTGGAGTGCAAGGTGAACCTATGAGTAATGTCCGTGCTGATGCTTGCTTCATTAATCCTTCAATTATTGGTGACACCGGTCCATTAGTTACATCACGAGGAAAAACTATTTTGGGAGATGCCACAAATCCCATGGAGAACACTGAGCTTCAAGAGCATTTAGTTGCAGGAATGGCAATTACTCCCTCTTCCCTTGCTGCCATTCTTGCTGCTAGAATCGGTCTTGAAGAAAATTTGGAGAATTCATCAGCCTTGCCTTCCTCATTCTGCTCAATGGGGGCACTGGGGCCATTCTTCAACTATTTGCAAGGTACTTCGAACCCTTTATCTGCAACTTTTGAGGACTGTGGTTACAATGAAGTTCCTAGCAAGTGGAATACTAACAAGTTTCCTAAAGCTCCAGAGATTGATGGAACCTGTCAACCTTATTCTTCTATAACAAATCTGGATCCAAATGAATGGACATCATCAAATCTTGCAAACATGGCCAATCATGCTTACCATGCCTCTAACTTTAGTAAGGAACTTTCTCTAAGTCTTGCAACATCTACTACCGCAGGACAGAGCTCGGAGGTGAGTTGCTCTAATGTGACCCCATGCATGAATGGAACCATGTCAGGGTTGGAGCAAGCCTCATGCAGCAGTAGTAGGGAACTTTCTATTAATTTGGGTGGTAATAAATATGTACAGTTTTCACCGGAAGTTCTAGAATCAAGATACCTTGTTGGGATTCAAGAGATACTTGCTCAAATTGCAAGATATTCATTTGGAAATCTAGAACAGTTAAAGTATTCAGCCGCTGGTAATAGAACAGGTGGAAACAAGTCAGCTTCAGCTTTTCGACCTAAGAGAAGGATCGTCATAGATCACGATGCAAATTCTATGTGCGAAGCTCATGCAGAGTCTCCGTTGCAAATGCATGCTGCTGAATCAAAAAAGGCCCAACTGCTGACACTTCTACAACTGGTGGACAATCGATATAGTCAGTGTTTGGATGAGATACACACTGTTGTATCCGCATTCCACGCTGCTACAGAACTGGACCCGCAAACACATGCACATTTTGCTCTTCAAGCCATCTCTGTCCTCTACAAGGACCTACGAGAGAGGATTAGCAATTACATTCTTGCCATGGGATCAAATTTTAACAACTCGTGCTCAGAAGAGAATGAATGGTCTGTTGAAACTTCATTCCTTCAAAAGCAATGGGCTCTGCAGCAGTTGAAAAGAAAAGATCAATTGTGGAGGCCCCAAAGAGGCTTGCCAGAAAGATCCGTGTCGGTTCTACGGGCTTGGATGTTTCAGAATTTCCTGCATCCGTATCCTAAAGATGCGGAGAAGCACTTACTTGCAGTAAAAAGTGGGTTGACGAGAAGCCAGGTATCCAATTGGTTTATAAATGCTCGTGTTCGGCTGTGGAAACCTATGATTGAAGAGATGTATGCAGAAATGAATAAAAGAAAGGCCTGTCGAAATGAAGAAGGAATGCTGAGCAACCACGGAAACAGGATAAGCATGAGCAGTCAAAATGTTAACTATAGGTGA 1713 0.425 MLMESDMYIAPLDISGRDATVIIDEISQNSTPNPLIQCYSLDLNNQSHIINEISMLSGVQGEPMSNVRADACFINPSIIGDTGPLVTSRGKTILGDATNPMENTELQEHLVAGMAITPSSLAAILAARIGLEENLENSSALPSSFCSMGALGPFFNYLQGTSNPLSATFEDCGYNEVPSKWNTNKFPKAPEIDGTCQPYSSITNLDPNEWTSSNLANMANHAYHASNFSKELSLSLATSTTAGQSSEVSCSNVTPCMNGTMSGLEQASCSSSRELSINLGGNKYVQFSPEVLESRYLVGIQEILAQIARYSFGNLEQLKYSAAGNRTGGNKSASAFRPKRRIVIDHDANSMCEAHAESPLQMHAAESKKAQLLTLLQLVDNRYSQCLDEIHTVVSAFHAATELDPQTHAHFALQAISVLYKDLRERISNYILAMGSNFNNSCSEENEWSVETSFLQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKACRNEEGMLSNHGNRISMSSQNVNYR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01284 570 SUPERFAMILY Homeodomain-like 473 540 IPR009057 -
Pste2g01284 570 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 235 554 - -
Pste2g01284 570 CDD homeodomain 471 532 IPR001356 GO:0003677
Pste2g01284 570 ProSiteProfiles 'Homeobox' domain profile. 468 531 IPR001356 GO:0003677
Pste2g01284 570 SMART prehox3 285 429 IPR006563 -
Pste2g01284 570 Gene3D - 474 553 - -
Pste2g01284 570 Pfam Homeobox KN domain 488 527 IPR008422 GO:0003677|GO:0006355
Pste2g01284 570 Pfam Associated with HOX 291 428 IPR006563 -
Pste2g01284 570 SMART HOX_1 471 535 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01284 Pste-Chr2 14163257 14165600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01284 231 544 Homeobox Transcription Factor Family AT4G32980 56.013 2.46e-104 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste2g01284 POX 2.1e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01284 2 14163257 14165600 Pste2g01284 2 14163257 14165600 ECH
Pste8g00586 8 3023728 3027677 Pste2g01284 2 14163257 14165600 PCT