Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01279 TTATTTTCAGTTCCCACATGGAAACCAATGACTGTTGTGAAAAACAAGGGACCTGGTCTTCTGAAGAGGACCAAAGTCTCTTCAACTATGTTCAACTCAGTGGAGAAGCTAATTGGAGAGACCTTCCCAAAACATCTGGCTTGAATCGATGTGGTGAGAGTTGCAGACACCCTTGGTTGAACTATCTCAAGCCACCCATTGATTCAGGAAACATTTCTTTGGATGAACAAGAGCTCATAATCAGACTGCATAAACTCTTGGGAAATAGATGGTCTATCATTGCTGGACGCTTACCAGGACGCACCGAAGATGAGATAAAAAACTATTGGAATACCTATTTGAGCAAGGAGGTAGAAGAGATGAAAAATAATAACAACAATTTAATTCCAAGCACAACCGTGTCAACTACTAGCATGTCTAGTTGCTCCGAAAATTACTTTGATACAAATCCCACGGAGTCTCCAAACCCTGTGATTAAACCTAAAGCTGTGAGGTTATCTAAGGTTGTTTCAAGAAAGTGGATGGAACGGACAAAGTGCTTTGCAATATGTGATGGATTATATGTTGTGACAGAAGAAAGAGATGGGGGAAAT 593 0.4047 METNDCCEKQGTWSSEEDQSLFNYVQLSGEANWRDLPKTSGLNRCGESCRHPWLNYLKPPIDSGNISLDEQELIIRLHKLLGNRWSIIAGRLPGRTEDEIKNYWNTYLSKEVEEMKNNNNNLIPSTTVSTTSMSSCSENYFDTNPTESPNPVIKPKAVRLSKVVSRKWMERTKCFAICDGLYVVTEERDGGN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01279 192 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Pste2g01279 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Pste2g01279 192 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Pste2g01279 192 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Pste2g01279 192 CDD SANT 12 57 IPR001005 -
Pste2g01279 192 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 141 - -
Pste2g01279 192 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Pste2g01279 192 FunFam MYB-related transcription factor 9 62 - -
Pste2g01279 192 Gene3D - 66 135 - -
Pste2g01279 192 SUPERFAMILY Homeodomain-like 10 104 IPR009057 -
Pste2g01279 192 Gene3D - 4 63 - -
Pste2g01279 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Pste2g01279 192 CDD SANT 67 108 IPR001005 -
Pste2g01279 192 SMART sant 9 59 IPR001005 -
Pste2g01279 192 SMART sant 62 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01279 Pste-Chr2 14113448 14116247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01279 1 112 MYB Transcription Factor Family AT4G09460 55.172 1.00e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g01279 Myb_DNA-binding 1.4e-09 CL0123