Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01268 AAATTTAGTTAGATGTGAAATAAAAATGTGGAATGGCTCTGTCATATTAATTACTTATCTTTGTCATGGTCGTCAAAAGTGTCCTTTTTAATATATATCCCTTCTTTGGTCTGCACTTGCATTTTCTTGTTCTACTGAGTAACTTGGTCGATGATGAATGGAAGGAACAGGTTCCCCTTTACTCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAGTACATGGCTTCAGGTATTTCCATTCCACCTGATCTTCTCTTCACCATAAAAAGAAGCTACTTTGATTCCTCTCTCTCCTCAAGGCTTTTGCATAACCAGCCACAGCACTTTGGATGGAACTACCTTCAGATGGGTTTGGGAAGAAAAATAGACCCTGAGCCTGGTAGGTGTAGAAGAACTGATGGCAAGAAATGGAGGTGCTCCAAAGAGGCATATCCTGATTCTAAGTACTGTGAGAGGCACATGCATAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAATCAACAACTACGCCAACAAATACAAACACTAACACAAATGCTTCAACACAACAACCAATCTCATCAATCACCAAAAGCAATAACACTCTTTCACCTCTTGCATCTTCTGAGACTCACCAACACTATGGCTCCTTTCTCTATCATCACCCACCTTCAAGGTCCTCTGGCATTGGCTTGTCATTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACACAGACTGCAGGAGTAGGTATGTTTATGGAGAGAAAGAAGAGGTGGATGAGCATGCTTTCTTCACAGAACCTTGTGGTGTTATGAAAAGCTTTTCTGCTTCCTCTATGGATGATTCTTGGCAACTCACACCATTGACTATGAGCTCTTCATCTTCTACCAAACAGAGGAGTTCCTTTGGTTTGTCCAATGATTATTCATATTTGCAACTTCAGAGCCACTCAAAGCAGCAAGAGCATCAAGATCAGGGTTGCTACATGTTAAGTGGTGGTGGTCAACTTGGGAAAGAAGAACCTCAGAAAACCGTTCATCGCTTCTTTGATGAATGGCCCCACAAAGCAAAAGAAGGATCTTGGCTTGATTTGGATGATAAATCTTCCACAACCCAACTTTCAATTTCCATTCCCACCTCTTCTCATGATTTTCCAACCTTCAGTTCAAGAAACCACCATGGTAATTAA 1215 0.4148 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSSLSSRLLHNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKSTTTPTNTNTNTNASTQQPISSITKSNNTLSPLASSETHQHYGSFLYHHPPSRSSGIGLSFEDNSAPLFLDTGSCSQSNTDCRSRYVYGEKEEVDEHAFFTEPCGVMKSFSASSMDDSWQLTPLTMSSSSSTKQRSSFGLSNDYSYLQLQSHSKQQEHQDQGCYMLSGGGQLGKEEPQKTVHRFFDEWPHKAKEGSWLDLDDKSSTTQLSISIPTSSHDFPTFSSRNHHGN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01268 354 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste2g01268 354 PANTHER GROWTH-REGULATING FACTOR 5 8 342 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste2g01268 354 MobiDBLite consensus disorder prediction 332 354 - -
Pste2g01268 354 MobiDBLite consensus disorder prediction 108 158 - -
Pste2g01268 354 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste2g01268 354 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Pste2g01268 354 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste2g01268 354 MobiDBLite consensus disorder prediction 120 158 - -
Pste2g01268 354 Pfam WRC 78 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01268 Pste-Chr2 14042076 14043509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01268 7 120 GRF Transcription Factor Family AT3G13960 71.053 3.87e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pste2g01268 WRC 7.3e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01268 2 14042076 14043509 Pste2g01268 2 14042076 14043509 ECH
Pste6g03592 6 25003930 25006604 Pste2g01268 2 14042076 14043509 PCT