Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01244 GTCAATTTGTGGTCCCATCCTCGTCGAGAAAAAGAAAAACCCCCGAACGGCTTTGTACTGAGCAATTCGCGAAACCCTTCGATCAAAGGTTGAAATCGAAATGCAGAACAAGTCGACATTGCCACTGAGCAACGTGAATGCGAACAAGAAGAGGAAGGAATTGGACAGCAAGGAAACGTTGGTGAAGCTTCTAAGATGGCATTTTGGGTACCCTGATTTCAGGGGCATGCAATTGGACGCTATTCAGGCTGTGCTCTCAGGAAAAGATTGTTTTTGTCTTATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCAAAAGCAGGAATTGTGCTTGTTGAAAACCAAGTAATGGCACTAAAGGAGAAAGGGATTGCAGCAGAATTTCTCTCCTCAACGAAAACAGCTGCTGCAAAATTAAAGATTCATGAGGACCTTGATTCTGGAAAACCTTCTTTAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACACCGGGGTTTATGTCAAAACTGACAAAGATCTATACTAGGGGGTTGCTAAATCTCATTGCCATAGATGAGGCGCATTGCATCTCAAGTTGGGGTCATGATTTCAGACCTAGCTACCGGAAGCTTTCATCTTTGAGAAACCACCTACCAGATGTACCAATACTAGCTCTGACTGCTACAGCTGTACCTAAGGTTCAGAAAGATGTAGTTGAGTCCTTGCAGATGCAAAATCTACTAATCCTCAAGTCTTCATTTAATCGTCCTAATATATATTATGAAGTTAGATACAAAGATCTATTGGATGATGCATATTCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCTATAGTGTACTGCCTTGAACGTTCAATGTGTGATGACTTGTCAACTAATCTATCACAAAGTGGCATTTCATGTGCTGCTTATCATGCAGGATTAAATAATAAAATGCGAACTTCAGTGTTAGATGATTGGATTTCTTCTAAGATAAAAGTTGTTGTTGCCACTGTTGCTTTTGGGTATGGCATTGATAGAAAGGATGTCAGAATTGTGTGCCACTTCAATATTCCCAAGTCAATGGAAGCATTCTATCAAGAGTCAGGCAGAGCCGGCCGTGATCAATTGCCATCTAGAAGTCTGTTGTACTATGGGGTAGATGATCGCAAAAGAATGGAATTTATATTAAGTAAATCAGGGAGCAAGAAGTCACAGTCGTCTAGTTCACAAGAAGAATCATCCAAAATGTCCCTGATTGCTTTCAATCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGCAGGAAAAGGATTCTCGAGAGTTTTGGGGAACAGGTAACTGCATCATTATGTGAAAAAACGTGTGATGCCTGCAGACATCCAGACTTGGTTGCCAGATATTTGGAGGACCTCACAGCTGCTTCTGCACTACGTCAAAAAAATGGTTCTTCTCGAGTGTTTATAACCAGTTCCACTGATGCAATTGATGGGGAACAATTATCTGAATTCTGGAGTCGGGATGAGGAAGCAAGTGGATCCGAGGAAGATATATCTGATTCCGATGATGGTAATGAGGTTGTCAACAACCTAACCCGGTCAAAGTTTCAATCCAAAATGGGAGTAAATGAAAAACTTGCTATGTTACAAAGGGCAGAAGAAAACTTTTATCGAAATAACAACACTTCTAAACAGAGCAACAAAGTTGACAAAAATGCTATTTCTGATCCAATGCGAGGAGCAAGCAGGCAAAGGTTACAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGAAATGGAAGCAGCAGCATCTTTCCTTGAAGATGAATGCTTCAAGAAATATGGCAAGGCTGGCAAATCGTTCTATTATTCGCAAGTGGCAAGTACTGTAAGATGGCTTACAACTGCAAGTTCTATCGAATTGATGAGCCGGCTTTGTGCAATTAATGCTTCCACCCCAATGAATGTCTTGTCTGAAGCTGAACAACCCCTCACACCAGCTTCTGAACAGCCCCTCACATCGCCACCTGCTTTAGATCCATGTGCAAAAGATACCAGAAATGATCACTCAGGCAATGCTAGATCAGAAACTTCCCCATGTGTTGTGCCAATGCAAATTTCTTCGTTTAATACCAAGTTGCCACAAATACCGTCCTTCTCTGAATTTGTAAATAGTAGGAAAGCAAAAGGGGACCAATTACATGACACAAAAAAGCATTCGTCAAGGGTCGAAAAGAAGATGAGGATGGATACACTAGATTTACTTAATTGCAAAGTATCAAGTGCCAACTTTGGTTTTGAATCATTTTCGTCATTTTCATATAAGCGTAAAATTCCTCTTGAACCTTCAGAGCACCATTGGTGCAGTGTTTTTGTTCGATCAAAGCTTTGTCTAAGCAATAACTTAAAGGAAACAGTTCTGCAGCAGCTGTTT 2458 0.4101 MQNKSTLPLSNVNANKKRKELDSKETLVKLLRWHFGYPDFRGMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGIVLVENQVMALKEKGIAAEFLSSTKTAAAKLKIHEDLDSGKPSLRLLYVTPELIATPGFMSKLTKIYTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPILALTATAVPKVQKDVVESLQMQNLLILKSSFNRPNIYYEVRYKDLLDDAYSDLSNTLKSLGDVCAIVYCLERSMCDDLSTNLSQSGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGYGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILSKSGSKKSQSSSSQEESSKMSLIAFNQMVEYCEGSGCRRKRILESFGEQVTASLCEKTCDACRHPDLVARYLEDLTAASALRQKNGSSRVFITSSTDAIDGEQLSEFWSRDEEASGSEEDISDSDDGNEVVNNLTRSKFQSKMGVNEKLAMLQRAEENFYRNNNTSKQSNKVDKNAISDPMRGASRQRLQNALKQVQQRLDNFKIEMEAAASFLEDECFKKYGKAGKSFYYSQVASTVRWLTTASSIELMSRLCAINASTPMNVLSEAEQPLTPASEQPLTSPPALDPCAKDTRNDHSGNARSETSPCVVPMQISSFNTKLPQIPSFSEFVNSRKAKGDQLHDTKKHSSRVEKKMRMDTLDLLNCKVSSANFGFESFSSFSYKRKIPLEPSEHHWCSVFVRSKLCLSNNLKETVLQQLF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01244 786 Pfam DEAD/DEAH box helicase 43 201 IPR011545 GO:0003676|GO:0005524
Pste2g01244 786 Gene3D - 2 221 IPR027417 -
Pste2g01244 786 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 48 214 IPR014001 -
Pste2g01244 786 MobiDBLite consensus disorder prediction 635 673 - -
Pste2g01244 786 CDD DEXHc_RecQ 29 221 - -
Pste2g01244 786 MobiDBLite consensus disorder prediction 473 497 - -
Pste2g01244 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 213 IPR027417 -
Pste2g01244 786 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 245 386 IPR001650 -
Pste2g01244 786 Pfam RecQ zinc-binding 359 430 IPR032284 -
Pste2g01244 786 Coils Coil 553 573 - -
Pste2g01244 786 Gene3D - 222 448 IPR027417 -
Pste2g01244 786 SMART ultradead3 36 230 IPR014001 -
Pste2g01244 786 Pfam Helicase conserved C-terminal domain 246 344 IPR001650 -
Pste2g01244 786 SMART helicmild6 265 346 IPR001650 -
Pste2g01244 786 FunFam RecQ family DNA helicase 222 447 - -
Pste2g01244 786 MobiDBLite consensus disorder prediction 526 545 - -
Pste2g01244 786 CDD SF2_C_RecQ 222 355 - -
Pste2g01244 786 MobiDBLite consensus disorder prediction 526 542 - -
Pste2g01244 786 NCBIfam RecQ family ATP-dependent DNA helicase 30 433 IPR004589 GO:0004386|GO:0006310
Pste2g01244 786 PANTHER DNA HELICASE RECQ FAMILY MEMBER 16 597 - -
Pste2g01244 786 FunFam ATP-dependent DNA helicase RecQ 18 221 - -
Pste2g01244 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 450 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01244 Pste-Chr2 13759124 13771988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01244 33 344 Eukaryotic Initiation Factors Gene Family AT3G19760 21.176 4.67e-11 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01244 2 13759124 13771988 Pste2g01244 2 13759124 13771988 ECH