Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01243 GTGGTTTTGTTTGGCAAGTAATGTTTTCCTGACTCCCCCACAAAAGTTATTGTTATAATTGAGTGGTGCTGTGTACTGGCGAATGGCGACAGAATCTCTGCGCTTTGACATAAAAATTGATCACGAGTTCATTGCAGGCAGCTACCCAAGTGTGCGTAAAGCAAAAGCAAAAGCACTTCTTCGAAAACAGAACCCTAGAAATAGCCAACGCAGAATCTGTTTCCGAACGTGAAAGCATAAGCATGGCGTTTGAGTCCAACCAAGTCACTGCCACCAACACCCTCCAATCCATATGCTACAACCGCGGTTCCCTCCAGCTTCTCGATCAGCTTCCTCTGGAGACAATTTACTTGGAAATTCGGGATTCTACGGATGGCTGGAATGCCATACGGGAAATGGTGGTCCGGGGAGCACCAGCTATTGCGATTGCAGCGGCACTCTCTCTGGCTGTGGAGGTGTCCAATTTAGATGGTTTCAATGGGTCAACTACCGATGCTGTTTCCCTCCTGCAGAAGAAATTAGATTATCTAGTCACAAGTCGGCCAACTGCAGTGAACCTATCAGATGCTGCTACAAAACTCAAAGAAGTAATATCAAATGCTGCTGCTACCGCGTCAGATGGCAGGAGCGTTTTCCAGGTGTATATAGATGCTGCTGAAATTATGCTTGAGGATGACGTTGCCTCAAATAAAGCTATTGGTTCTTATGGAGCTAGTATTATTCAACAACAAACACAGAAGCAAAAGCTTTCTGTTTTGACTCATTGCAATACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGGGTGATCCGAGCACTTCACAGTGGAGGAGTTCTAGAAAGGGCCTATTGCACAGAAACACGCCCATTCAATCAAGGATCTAGACTTACTGCCTTTGAGTTGGTGCATGAAAAAATACCAGCAACTCTTATTGCGGATTCTGCTGTAGCTGCATTAATGAAAGCAGGACGTGTCGATGCTGTTGTTGTGGGGGCAGATCGCGTCGCATCAAATGGCGACACAGCCAACAAAATTGGAACCTACAACGTTGCCTTGTCTGCCAAGTTTCATAATGTACCTTTTTATGTGGCTGCACCCCTCACTTCCATTGATTTATCACTTTCTTCTGGACAAGAGATTGTGATTGAGGAGAGGTCTCCCAAGGAATTGTTGAACACACATGGAGGACTCGGAGAGCAGATCGCTGCCTCGGGAATTTCCGTGTGGAACCCAGCTTTTGATGTTACTCCTGCTGATTTAATAGCTGGGATCATCACCGAGAAGGGTGTCATTACTAAGACATCTGCTGGTGACGCATTTGACATCAAAGCTTTCGCCCAGAAGAAAACTGGTTAAGGTGGAGTGAGATTTTTCTCACATGTTACAACGTTATAGATTTGAAAGTATTGGAGTTGTAGGGTTCTTTGAGAGCCTCTTTGCTACCAAATTTAGATAAGACTTAGTAAGACCTAATTGTATAAGACGATAACATTTTAATAATATTTTGCAGTGTTTGGTATGACATTATAGATTTTTCCGTTTTGATGCGCTT 1560 0.4429 MAFESNQVTATNTLQSICYNRGSLQLLDQLPLETIYLEIRDSTDGWNAIREMVVRGAPAIAIAAALSLAVEVSNLDGFNGSTTDAVSLLQKKLDYLVTSRPTAVNLSDAATKLKEVISNAAATASDGRSVFQVYIDAAEIMLEDDVASNKAIGSYGASIIQQQTQKQKLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAVAALMKAGRVDAVVVGADRVASNGDTANKIGTYNVALSAKFHNVPFYVAAPLTSIDLSLSSGQEIVIEERSPKELLNTHGGLGEQIAASGISVWNPAFDVTPADLIAGIITEKGVITKTSAGDAFDIKAFAQKKTG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01243 373 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 364 IPR005251 -
Pste2g01243 373 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 10 370 - -
Pste2g01243 373 Gene3D - 12 201 IPR027363 -
Pste2g01243 373 Pfam Initiation factor 2 subunit family 54 354 IPR000649 GO:0044237
Pste2g01243 373 SUPERFAMILY NagB/RpiA/CoA transferase-like 11 357 IPR037171 -
Pste2g01243 373 FunFam Methylthioribose-1-phosphate isomerase 167 365 - -
Pste2g01243 373 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 15 355 IPR005251 -
Pste2g01243 373 Gene3D - 202 366 IPR042529 -
Pste2g01243 373 FunFam Methylthioribose-1-phosphate isomerase 12 201 - -
Pste2g01243 373 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 40 355 IPR011559 GO:0044249
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01243 Pste-Chr2 13753500 13757585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01243 51 373 Eukaryotic Initiation Factors Gene Family AT2G05830 78.704 7.03e-178 495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01243 2 13753500 13757585 Pste2g01243 2 13753500 13757585 ECH