Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01238 ATGGGCGTTGTTCGCGTGTATTTGTTTTTGTTTTTGTTCTTGTTGTTGTCCGTGTGTTGTGCATTAGAAACCCAATCCCTCCTTCGTCTGAAAGAATCCCTAACGAACTCGGAGCGCGCCCTGGCCTCATGGATCCCAAACGTGTCCCCATGCTCCGGCAGCTGGACCGGCGTGGTCTGCTTCGACAACGTGATAACGGGCCTGCATCTGTCGGACCTGGGGCTCTCAGGCCCAATAGACGTGGAGGCGCTGGCGGAGATTCACACCCTGAGAACCCTGAGCTTCGTCAACAACTCGTTCTCAGGCCCAATCCCACAGTTCAACAAACTGGGAAGCATCAAGTCCCTGCTCTTAACGCAGAACAACTTCTCCGGAAGCATCGCCAGCGACTTCTTCTCCCCGTTGAAGTCCCTCAAGAAGCTATGGCTCTCCGGTAACAACCTGACGGGAAGCATCCCGGAATCGTTGACGGAGCTGGAACTGCTGAAAGAGCTGCACCTGGAATTCAACTCCTTCACAGGGCGAATCCCGAACCTGAGGCAAGAGCTGAGGTCGCTGGACGTGTCGAACAACAAACTGGAAGGGCCCATTCCGGAGAAGATGGGCCGGTTCAGCGCGAGATCCTTCGAGGGGAACGAAGGGCTGTGCGGGAAGCCGTTGGAGAAGACATGCGACGATGTGATATCGACAATGTTGCCGGCGGCGGGGAAGGTGGGGGAAGAGGAGTACGAATCGGGGTGGGCGAAGAGGGTGATAGTGGTGATGGTGGTGGCGGCGGTGGCGGCGGTGATATTTTTATTCGCGTCGTCGTCGTCGAGGAGGCGGAGGGAGGGGGATTTCAGGGCGGTGAGCAGGAGCAGCAACGCGGAGGAGGTGGTGGAGGTGCAGGTGCCGAGCGTGAGGGCGGAGAGGAGGGAGGTGGGAGGGAACAACAAGAGGGGGGAGATAGTGATTGTGAACGATGCGAGGGGGATTTTTGGGCTTCAGGATTTGATGAAGGCCACGGCGGAGGTGCTCGGGAATGGGGGCCTGGGCTCCGCTTATAAGGCCTCCATGACCAATATTGGTTTGTCCGTGGTCGTGAAGCGGATGAGGGAGATGAATAAGATTGGTAAGGACGTCTTTGACGCAGAAATGAGGCAGTTTGGAAGGTTACGACACCCTAATCTTATCACTCCCCTCGCTTACCATTACCGTAGGGAGGAGAAGCTCCTCATCAATGAGTACATGCCTAAAGGAAGCTTGTTTTATGTCTTGCATGGTGATAGAGGACTATCCCACTCTGAACTAACTTGGCGTACCCGTTTGAAGATAGTTAAAGGAATTGCAAGAGGATTGAACTTTCTTTACACTGAATTTTCCACCTATGACCTGCCCCATGGAAACCTCAAGTCTAGCAATGTTCTACTAACAAATGATTACGAGCCTCTCTTGAGTGACTATGCCTTTCAGCCACTAATCAACCCCAGCGTTGCTGTACAAGCATTGTTTGCCTTCAAATCCCCAGATTATGAACAAAACCAGAAAGTTACACAGAAGACTGATGTCTATTGCCTTGGAATCATCATTCTTGAAGTCATCACAGGCAAGTTTCCTGCCCAGTATCACAGCAATGGCATGGGCGGCACTGATGTTGTGCAATTGGTCCACACTGCAACTTCTGAGGAAACAGAAGCCGAGTTGATCGATTCCGAGTTGCAAAGTGAATCCTCGAATTCGCGCAATCAGATGCTGAAACTTCTGCGTATTGGGGCTGCTTGCACTGAAAGCAACCCTGAACAAAGACTAAAAATGAAGGAAGCTATTAGAAGGATAGAGGAGGTAAAGGTTTAA 1833 0.5221 MGVVRVYLFLFLFLLLSVCCALETQSLLRLKESLTNSERALASWIPNVSPCSGSWTGVVCFDNVITGLHLSDLGLSGPIDVEALAEIHTLRTLSFVNNSFSGPIPQFNKLGSIKSLLLTQNNFSGSIASDFFSPLKSLKKLWLSGNNLTGSIPESLTELELLKELHLEFNSFTGRIPNLRQELRSLDVSNNKLEGPIPEKMGRFSARSFEGNEGLCGKPLEKTCDDVISTMLPAAGKVGEEEYESGWAKRVIVVMVVAAVAAVIFLFASSSSRRRREGDFRAVSRSSNAEEVVEVQVPSVRAERREVGGNNKRGEIVIVNDARGIFGLQDLMKATAEVLGNGGLGSAYKASMTNIGLSVVVKRMREMNKIGKDVFDAEMRQFGRLRHPNLITPLAYHYRREEKLLINEYMPKGSLFYVLHGDRGLSHSELTWRTRLKIVKGIARGLNFLYTEFSTYDLPHGNLKSSNVLLTNDYEPLLSDYAFQPLINPSVAVQALFAFKSPDYEQNQKVTQKTDVYCLGIIILEVITGKFPAQYHSNGMGGTDVVQLVHTATSEETEAELIDSELQSESSNSRNQMLKLLRIGAACTESNPEQRLKMKEAIRRIEEVKV 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01238 610 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Pste2g01238 610 SUPERFAMILY Protein kinase-like (PK-like) 337 606 IPR011009 -
Pste2g01238 610 ProSiteProfiles Leucine-rich repeat profile. 137 159 IPR001611 GO:0005515
Pste2g01238 610 FunFam Nuclear pore complex protein NUP107 20 178 - -
Pste2g01238 610 Gene3D Ribonuclease Inhibitor 22 131 IPR032675 -
Pste2g01238 610 SUPERFAMILY L domain-like 19 204 - -
Pste2g01238 610 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 609 IPR046959 -
Pste2g01238 610 Pfam Protein kinase domain 336 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01238 610 ProSiteProfiles Protein kinase domain profile. 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01238 610 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Pste2g01238 610 Gene3D Phosphorylase Kinase; domain 1 300 409 - -
Pste2g01238 610 Pfam Leucine Rich Repeat 183 210 IPR001611 GO:0005515
Pste2g01238 610 Gene3D Ribonuclease Inhibitor 132 225 IPR032675 -
Pste2g01238 610 Gene3D Transferase(Phosphotransferase) domain 1 410 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01238 Pste-Chr2 13697709 13700455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01238 6 608 Receptor kinase-like Gene Family AT3G42880 49.609 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste2g01238 Pkinase 1.3e-27 CL0016