LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g01236	GCCCATGAAGCTCCCATATCCAATCCACGTATGGATTAGAAATACCATTGGCCCTCATTTAATATTTCCGTTCCAAGCAGAATATCATAACTTATCCATCATCTGGATATAGCAGCAGATAAAGCGTCAGAAAACACAAAGGGAGGGACCTTTCTATTGTTCTAATTCCATCCAAGACATTCTTCTCTGATTCATGGCTTTAGCTATTTCCTCAACCGCATTATCAACTCTTCCAAACAGAGAAATACGTCAAAAGATTTTCCCAGAAAGAACACCAACATGCTTGAGTTTGACTAAAAGAACAATTGCAAATGCAACAAAAGGAGTTTCTGCTGTCTGTGAACCACTTCCTCCTGATAGGCCATTGTGGTTCCCTGGTAGTTCACCTCCAGAGTGGCTTGATGGAAGTCTTCCTGGTGATTTCGGTTTTGACCCTCTTGGATTAGGTTCTGATCCAGAGTTACTAAAGTGGTTCGCTCAGGCGGAACTAATGCACGCAAGATGGGCAATGCTTGCAGTATTCGGAATCCTGGTTCCGGAATTGCTCGAAAGAATGGGTTATATGGAGAACTACTCATGGTACGACGCTGGTGCGCGAGAGTACTTTGCGGACCCCACAACCCTGTTCATTGTACAAATGGGCCTGATGGGCTGGGCTGAGGGTCGAAGATGGGCCGATATGGTGAACCCAGGGTGTGTTGACATTGAGCCCAAAGTGCCGCACATTACGAAACCGAAGCCCGATGTAGGGTACCCTGGTGGGTTGTGGTTTGACCCAATGATGTGGGGACGTGGGTCACCCGAGCCCGTGATGGAGCTGAGGACCAAGGAGATAAAAAATGGAAGGCTTGCGATGCTGGCCTTTGTTGGGTTCTGGTTCCAAGCTATTTACACTGGGGAAGGACCCATTGAAAATTTGATGGCTCATATTGCTGATCCTGGTCACTGCAACATTTTCTCGGTAATGCTTTTACGAGGTAGTGCTATGTATAGTTTGAAGAAAAGAAGATATGCATCCGGAATGAATATAGAATCTAGCATTATGCTGCAGCAACAATATCGATTATTTACTTTAAACGTGTACTTTGTTTCCTAATCCAAGTTTACAATTAACACAAGGCTTTGATTCTTTGAAACAAAGTTAATTGCTGTTTTTTTAAATGACGAGAAGGGAAATTTTGTGCATGGATCTCATTTTCTTTATTGGATCAGATTATCAGACAAACCTCAAAAGAA	1236	0.4353	MALAISSTALSTLPNREIRQKIFPERTPTCLSLTKRTIANATKGVSAVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVFGILVPELLERMGYMENYSWYDAGAREYFADPTTLFIVQMGLMGWAEGRRWADMVNPGCVDIEPKVPHITKPKPDVGYPGGLWFDPMMWGRGSPEPVMELRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHIADPGHCNIFSVMLLRGSAMYSLKKRRYASGMNIESSIMLQQQYRLFTLNVYFVS	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g01236	300	Pfam	Chlorophyll A-B binding protein	65	231	IPR022796	-
	Pste2g01236	300	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	36	257	IPR001344	GO:0009765\|GO:0016020
	Pste2g01236	300	FunFam	Chlorophyll a-b binding protein, chloroplastic	66	251	-	-
	Pste2g01236	300	SUPERFAMILY	Chlorophyll a-b binding protein	55	258	-	-
	Pste2g01236	300	Gene3D	Chlorophyll a/b binding protein domain	66	251	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g01236	Pste-Chr2	13681415	13684169	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g01236	54	258	Chloroplast and Mitochondria Gene Families	AT3G61470	65.854	6.26e-102	297

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste2g01236	2	13681415	13684169	Pste2g01236	2	13681415	13684169	ECH