Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01231 AAAAGAACCCCCTTTTGAAAAACCCCACATATTCCTCGTGCTTCAATTTTCCACCTCCAACTTCAAAATTAAAGCTTAAAAAATAATAAATAATTTTATTTTATTGACCCAATAAAGCTTGGTTATATATAAGATGAAGGGTCGGAGACAAAGATTATCATTACATCCTAGGAGTCTCTTCCTTTGTGTTATAACGCGTTCTCTCACTTTCAACGTTTATTGTTTCTTTTGTGGGTAGATTCAATTTATCATGTCGAGCTCGTCGGAGTACTCTGAATTTTCCGGCCAGAAATTGGCGAAGTCGCCGGAAAAGTCAACTTTTTCTCAGACTTGCAGTCTGTTGAGTCAATACATCAAGGAAAAGGGTAGCTTTGGAGATCTTACTCTCGGAATGACATGCAGCACCGAATTATGTGGTTCACCTGAGACATCTTGTCAATCTGCTACAACTATGAACTTATTTCCTACCAAGGAAAACAATGTCACACCAAATAACCTGACAGCTATGGATTTGCTTTCTTTACAAGCTTCCTATCGTCCTTCTGAGGAGATTCCAACCTTGATTAACTCCAGTGGTATTAAGTCTGTGAACAAGGGGGCTAAAACTGCACAGATGACAATCTTTTATGCTGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAGAGCAAGTGAGATAATGTCCTATGCCACCAAAGGGATTCCCCAAAGCCAGAACAATTCTCTCTACACCTACACACAGAGCCAGCCTTCTCTTCCTCCTAATTTGGTCAGAACTTCTGCTGATTCAAGTGCTCCAATTATTCCCACTGTGAATGTTTCCAACTCCATTCATGAGCACTCTCAAGCAGCTTCCAGACAAGTTGTTTGTGATCTGCCAATTGCAAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAGAGAAAGGATAGAATAGCTTCCAAAGCACCATATCAAGTAGCAAATGTGCCTGCTAATAACAAGCCAGCTGAATCCATGCCATGGCTTGGACTGAGTGCTATTTCACCTCAAATCTAAGAGCAGCTACAGATATATGTAATTTCAAGCATATTTTTGTTGTGAAAATGCTAAATAAGTCAGAAGTTTTTTGCCAGAAATCTTGACTAAGATTCTGGTTGTATTTTTTTTCCTGACTGGATAGCATTATTACTTCTTTATTTTTTTCTATAATGTTTTAAGATGTTTTATGGGCTTATGGTTAGCCATTTATTTTTCATAGTTGTTTCGGCTGTGCTGGGCCATATCATAGATCTAACTATTGGTTAGTTTCTGCTGCTCTAATTATAGTGATTCAATATATTCATTATTATTATTATTATTAAGATGAATCCCTTTTCTC 1361 0.3799 MSSSSEYSEFSGQKLAKSPEKSTFSQTCSLLSQYIKEKGSFGDLTLGMTCSTELCGSPETSCQSATTMNLFPTKENNVTPNNLTAMDLLSLQASYRPSEEIPTLINSSGIKSVNKGAKTAQMTIFYAGQVVVFDDFPADRASEIMSYATKGIPQSQNNSLYTYTQSQPSLPPNLVRTSADSSAPIIPTVNVSNSIHEHSQAASRQVVCDLPIARKASLHRFLEKRKDRIASKAPYQVANVPANNKPAESMPWLGLSAISPQI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01231 262 ProSiteProfiles Tify domain profile. 115 150 IPR010399 -
Pste2g01231 262 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 242 IPR040390 -
Pste2g01231 262 SMART tify_2 115 150 IPR010399 -
Pste2g01231 262 Pfam Jas motif 211 236 IPR018467 -
Pste2g01231 262 Pfam tify domain 118 148 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01231 Pste-Chr2 13606814 13609410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01231 1 257 Tify Gene Family AT1G19180 39.636 1.45e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pste2g01231 tify 2.2e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01231 2 13606814 13609410 Pste2g01231 2 13606814 13609410 ECH