Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01226 AAAACTCTCTCTCAATTATTCCAAGTCCTGAAAATAGAAAAGGGTTATTTGAATAAATGTAAGAAAGCTAGGTGAGAGCAACAACAACATGGGGAGGGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGACCTTGGTCGCCAGAAGAAGACGCCAAACTCAAATCCTACATCGAGCAGCACGGAACCGGTGGCAACTGGATCGCTTTGCCACACAAGATTGGCCTTAAACGATGTGGCAAGAGTTGCCGTCTGAGGTGGCTCAACTACCTTCGCCCTAACATCAAGCATGGTGGGTTCTCCGAAGAAGAAGACAACATCATTTGCAGCCTCTACGTTAGCATTGGAAGTAGGTGGTCGGTCATTGCAGCACAATTGCCAGGAAGAACTGATAATGACATAAAGAACTATTGGAACACGAGGCTGAAGAAGAAGCTTCTAGGGAAGAACAGTAAGGAACTACAGTCACGGAACAAAGGAAACCGTGGTGTCGTTAAGCAGGAAAACAATTCCTCATTCTCGTTTCAGGAAAACGGTGCTCAACAACATGTACAGTCAATTTGGCCTGTGCTGCCACTTTCACCGTTCACAAACCAAAGCCCAAGTTTCAACGACCAGGACTCCATTAGAAAACTTCTAATCAAGCTTGGAGGAAGGTTCTCCGATGACTATCAACCCATCCTTGATGGGTTGAATCTTCCGTTCCCTCATGGTTCTCACTTGTCAGCACAACAAATTCAACAAGAGCAAGTCCATGTTGGCTCTTCTGGGTGCATGAACTCCATTGGCAACAACCCAGTACAATTTGGTCTCAGTAATGAGTATTGTGCTGAGTTGGTGCAAGGACAAGGGAGTTTCAGTAGTAGCACATCAATCGCAGAAATGATTTCAAGTAACGATTATTCTCAGGGTGGGTTGGAGTTCTTGTATGGGGAGGAAATGATTAGCGATAAGATAACGGGTGGTTGTGCTGCTTCTTCAAGTTGTGGGCAAAGTAGTAATTGGAGTGAGACCTGTTCTCTAATGTGCCCTCCTCTAAGCCCTCTTGCTGCTTCGAATTACGAGGGTACTGTGCGGCAAGACATGCTGCGAGGATGTGCTTTTCAAGAGTTGAGCTACCCTGGGTCGCAA 1132 0.4602 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKNSKELQSRNKGNRGVVKQENNSSFSFQENGAQQHVQSIWPVLPLSPFTNQSPSFNDQDSIRKLLIKLGGRFSDDYQPILDGLNLPFPHGSHLSAQQIQQEQVHVGSSGCMNSIGNNPVQFGLSNEYCAELVQGQGSFSSSTSIAEMISSNDYSQGGLEFLYGEEMISDKITGGCAASSSCGQSSNWSETCSLMCPPLSPLAASNYEGTVRQDMLRGCAFQELSYPGSQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01226 348 FunFam Transcription factor MYB36 70 143 - -
Pste2g01226 348 FunFam Transcription factor RAX3 7 68 - -
Pste2g01226 348 SMART sant 13 64 IPR001005 -
Pste2g01226 348 SMART sant 67 115 IPR001005 -
Pste2g01226 348 CDD SANT 71 113 IPR001005 -
Pste2g01226 348 Gene3D - 69 143 - -
Pste2g01226 348 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pste2g01226 348 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pste2g01226 348 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pste2g01226 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pste2g01226 348 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pste2g01226 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pste2g01226 348 Gene3D - 7 68 - -
Pste2g01226 348 CDD SANT 16 62 IPR001005 -
Pste2g01226 348 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pste2g01226 348 PANTHER OS09G0431300 PROTEIN 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01226 Pste-Chr2 13537604 13539094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01226 1 193 MYB Transcription Factor Family AT3G49690 64.734 3.73e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g01226 Myb_DNA-binding 2.4e-14 CL0123