Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g01223 | ATGGCCAGTGCGCAGCTCTCAGCAATCGCGTCTTCAATCTCAACGACGTCGTTTGAAAGGCTTCGACCTTCAGTGGCTCAGACTCCTTGCGCGGGCCGTGTTAGAATTGCCAATTTCTCTCAAAGGTCCTTCCGCGGTTTGGTTGTCAAAGCCGCCACTGTTGTTGCCCCTAAGTACACTGCCATTAAGCCTCTGGGTGATAGAGTACTTATAAAAATTAAGGAAGCAGACGAGAAAACTGAAGGTGGGATTTTGCTTCCTTCGACCGCTCAAACAAAGCCTCAAGGGGGTGAGGTGGTTGCTGTTGGAGAGGGAAAGTCAGTTGGGAAGACAAATGTGGAGATCAGTGTGAAGACTGGTGCACAAGTTGTGTATTCAAAGTATGCTGGTACTGAGGTAGAATTCAATGGTACAAAGCATCTTATTGTGAAGGATGATGATATTGTTGGCATCCTTGAAACTGATGACATCAAGGATCTTAAACCCTTGAATGATAGAGTCCTCATAAAGGTTGCTGAAGCTGAGGAAAAAACTGCTGGTGGTTTGTTGCTTACAGAGGCAACCAAGGAGAAACCTTCAATTGGAACAGTGGTAGCGGTTGGTCCAGGACCTCTGGACGATGAAGGCAACAGAAAACCTTTGTCCGTGACTCCTGGAAACACAGTTTTGTACTCCAAATATGCTGGAAATGACTTCAAGGGAAAAGATGGTGACTATATTACCTTGAGGGTCTCAGATGTCATGGCTGTCCTCTCCTAGGAACAGTTTGCTTTGGTTTTGTAACGTAGATTTTGTGTTCATCTTGAGAAAAGGGGAATTTTTAATTGTAATGACGTTTGGAAAATATAGTTGATTGCTATCTGTTCGTCGGACGATATGCATTATCTTTGGATTTTGTACACTGCTAGTGTTGAAACAAGTTCTGCAATTTTAGAACGTTTTCTAAATTATTGTTTAATGTGTTAGGAGAAAGAAAGGAAATGAAATTGATCTTTAT | 997 | 0.4273 | MASAQLSAIASSISTTSFERLRPSVAQTPCAGRVRIANFSQRSFRGLVVKAATVVAPKYTAIKPLGDRVLIKIKEADEKTEGGILLPSTAQTKPQGGEVVAVGEGKSVGKTNVEISVKTGAQVVYSKYAGTEVEFNGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSIGTVVAVGPGPLDDEGNRKPLSVTPGNTVLYSKYAGNDFKGKDGDYITLRVSDVMAVLS | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g01223 | 252 | FunFam | 20 kDa chaperonin, chloroplastic | 55 | 154 | - | - | |
Pste2g01223 | 252 | SUPERFAMILY | GroES-like | 60 | 153 | IPR011032 | - | |
Pste2g01223 | 252 | ProSitePatterns | Chaperonins cpn10 signature. | 160 | 184 | IPR018369 | GO:0005524|GO:0006457 | |
Pste2g01223 | 252 | Pfam | Chaperonin 10 Kd subunit | 62 | 151 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | Pfam | Chaperonin 10 Kd subunit | 160 | 250 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | Gene3D | GroES chaperonin | 54 | 154 | IPR037124 | GO:0006457 | |
Pste2g01223 | 252 | Gene3D | GroES chaperonin | 155 | 252 | IPR037124 | GO:0006457 | |
Pste2g01223 | 252 | PANTHER | 10 KDA HEAT SHOCK PROTEIN | 158 | 250 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | SUPERFAMILY | GroES-like | 158 | 251 | IPR011032 | - | |
Pste2g01223 | 252 | CDD | cpn10 | 62 | 152 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | PIRSF | Cpn21 | 1 | 252 | IPR017416 | GO:0006457|GO:0046914|GO:1901671 | |
Pste2g01223 | 252 | Hamap | Co-chaperonin GroES [groES]. | 159 | 252 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | PRINTS | 10kDa chaperonin signature | 139 | 152 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | PRINTS | 10kDa chaperonin signature | 84 | 105 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | PRINTS | 10kDa chaperonin signature | 62 | 77 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | PRINTS | 10kDa chaperonin signature | 118 | 130 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | CDD | cpn10 | 160 | 251 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | SMART | Cpn10_2 | 159 | 251 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | SMART | Cpn10_2 | 61 | 152 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | Hamap | Co-chaperonin GroES [groES]. | 61 | 153 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Pste2g01223 | 252 | ProSitePatterns | Chaperonins cpn10 signature. | 62 | 86 | IPR018369 | GO:0005524|GO:0006457 | |
Pste2g01223 | 252 | FunFam | 10 kDa chaperonin | 158 | 252 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g01223 | Pste-Chr2 | 13452377 | 13455103 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g01223 | 1 | 252 | Calmodulin-binding Proteins | AT5G20720 | 71.146 | 5.10e-125 | 353 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste2g01223 | 2 | 13452377 | 13455103 | Pste2g01223 | 2 | 13452377 | 13455103 | ECH |