Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01223 ATGGCCAGTGCGCAGCTCTCAGCAATCGCGTCTTCAATCTCAACGACGTCGTTTGAAAGGCTTCGACCTTCAGTGGCTCAGACTCCTTGCGCGGGCCGTGTTAGAATTGCCAATTTCTCTCAAAGGTCCTTCCGCGGTTTGGTTGTCAAAGCCGCCACTGTTGTTGCCCCTAAGTACACTGCCATTAAGCCTCTGGGTGATAGAGTACTTATAAAAATTAAGGAAGCAGACGAGAAAACTGAAGGTGGGATTTTGCTTCCTTCGACCGCTCAAACAAAGCCTCAAGGGGGTGAGGTGGTTGCTGTTGGAGAGGGAAAGTCAGTTGGGAAGACAAATGTGGAGATCAGTGTGAAGACTGGTGCACAAGTTGTGTATTCAAAGTATGCTGGTACTGAGGTAGAATTCAATGGTACAAAGCATCTTATTGTGAAGGATGATGATATTGTTGGCATCCTTGAAACTGATGACATCAAGGATCTTAAACCCTTGAATGATAGAGTCCTCATAAAGGTTGCTGAAGCTGAGGAAAAAACTGCTGGTGGTTTGTTGCTTACAGAGGCAACCAAGGAGAAACCTTCAATTGGAACAGTGGTAGCGGTTGGTCCAGGACCTCTGGACGATGAAGGCAACAGAAAACCTTTGTCCGTGACTCCTGGAAACACAGTTTTGTACTCCAAATATGCTGGAAATGACTTCAAGGGAAAAGATGGTGACTATATTACCTTGAGGGTCTCAGATGTCATGGCTGTCCTCTCCTAGGAACAGTTTGCTTTGGTTTTGTAACGTAGATTTTGTGTTCATCTTGAGAAAAGGGGAATTTTTAATTGTAATGACGTTTGGAAAATATAGTTGATTGCTATCTGTTCGTCGGACGATATGCATTATCTTTGGATTTTGTACACTGCTAGTGTTGAAACAAGTTCTGCAATTTTAGAACGTTTTCTAAATTATTGTTTAATGTGTTAGGAGAAAGAAAGGAAATGAAATTGATCTTTAT 997 0.4273 MASAQLSAIASSISTTSFERLRPSVAQTPCAGRVRIANFSQRSFRGLVVKAATVVAPKYTAIKPLGDRVLIKIKEADEKTEGGILLPSTAQTKPQGGEVVAVGEGKSVGKTNVEISVKTGAQVVYSKYAGTEVEFNGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSIGTVVAVGPGPLDDEGNRKPLSVTPGNTVLYSKYAGNDFKGKDGDYITLRVSDVMAVLS 252
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01223 252 FunFam 20 kDa chaperonin, chloroplastic 55 154 - -
Pste2g01223 252 SUPERFAMILY GroES-like 60 153 IPR011032 -
Pste2g01223 252 ProSitePatterns Chaperonins cpn10 signature. 160 184 IPR018369 GO:0005524|GO:0006457
Pste2g01223 252 Pfam Chaperonin 10 Kd subunit 62 151 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 Pfam Chaperonin 10 Kd subunit 160 250 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 Gene3D GroES chaperonin 54 154 IPR037124 GO:0006457
Pste2g01223 252 Gene3D GroES chaperonin 155 252 IPR037124 GO:0006457
Pste2g01223 252 PANTHER 10 KDA HEAT SHOCK PROTEIN 158 250 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 SUPERFAMILY GroES-like 158 251 IPR011032 -
Pste2g01223 252 CDD cpn10 62 152 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 PIRSF Cpn21 1 252 IPR017416 GO:0006457|GO:0046914|GO:1901671
Pste2g01223 252 Hamap Co-chaperonin GroES [groES]. 159 252 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 PRINTS 10kDa chaperonin signature 139 152 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 PRINTS 10kDa chaperonin signature 84 105 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 PRINTS 10kDa chaperonin signature 62 77 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 PRINTS 10kDa chaperonin signature 118 130 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 CDD cpn10 160 251 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 SMART Cpn10_2 159 251 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 SMART Cpn10_2 61 152 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 Hamap Co-chaperonin GroES [groES]. 61 153 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste2g01223 252 ProSitePatterns Chaperonins cpn10 signature. 62 86 IPR018369 GO:0005524|GO:0006457
Pste2g01223 252 FunFam 10 kDa chaperonin 158 252 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste2g01223 Pste-Chr2 13452377 13455103 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01223 1 252 Calmodulin-binding Proteins AT5G20720 71.146 5.10e-125 353
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01223 2 13452377 13455103 Pste2g01223 2 13452377 13455103 ECH