Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01194 TATTGGTTTACTTTGACTGACCCAATTGGTGTTGTGGTGTGGAGAGTTTGGGACTGTGCCGAGAGACGAAAAGACATTGATTTGGGGCCGGGGATTTTCCTTCTGATTTCTTCGCCAAGTTCCGGATTTGACCAATTGGAGGCATTGGGATATATATGTATTTGGAGGAGTTTGGTTATGATGTTACATTCTCAGGGGGGGTCTAGACATTGTAGTCTCCTTGCTGTCCTGAGTGGTAAATCACGTGACATTAAACAAAAGCAGAAGCAGGGTGCTGCTTCTGAGGATCAACCTTCTTACCCTTTTCCAGAGCTTGCTTGCTCTGGCCGTCTTGAGGTCAAGGTATTGATCAAACCTACTGCAGATGAAGTCAGTCGAGTCGTTGAACAATTGCAGCCTGATTTTGTTTACCTGCAAGGTCAATGGCTAGAAGATAGGGGAGAAATTGGATCTCTTGTATGGGAAGATTTTGACCTGTCTGTCCCAGAAGCCTTATGTGGATTGTTTTCTTCCAAATTACCTAATACTGTATATTTGGAAACTCCCAAGGGAGAAAAATTGGCAGAGGCACTCCATAATAAGGGAGTTCCGTACACTATCTATTGGAAAAATGAATTTTCAAAGTATGCATCTTCACATTTTCGTCATTCTTTTTTCTCTGTGGTACAAAGTACATCAAGCCATACATGGGATGCTTTCCAGCTAGCTCTGGCATCTTTTAGGCTATACTGTATACAAAACAATGTCTTACCTTCTAACAGCCAGAAGGGTTCTGGTAAGCTTGGTCCACAAATTTTTGGGATCCCTCCCAACATCGATGTTAGTCCAAGTGTAGCAGACACAAAGGAAGAGGAAGATTCACCTGAGACTATTTCTGCTGTAAAGATATATGATGATGATGTGAACATGAGATTTCTTGTTTGTGGAGTTCCATGCACATTGGATGCTTGTTTGTTGGGGTCATTAGAAGATGGGCTCAATGCTCTTCTATTTACAGAAATACGTGGCTGCAAACTTCACAATAGGACAAGTGCTCCACCACCACCTCTCCAAGCAGGAACATTCTCTCGTGGTGTAGTGACTATGCGTTGTGATATATCTACATGTAGTTATGCTCATATATCACTGTTGGTGTCTGGAAGTCCAGACACTTGTTTTAATGATCAGCTTTTGGAGAATCATATTAAAAAAGAGCTCATTGAGAAGTGTCAACTTGTCCAGGCATTTCCTAATCATGAACAAAGTAAATCACCTTCCTCTGAGCCTCGAAGATCAGCCTCAGTAGCTTGTGGATCTAGTGTGTTTGAAGTTTGTATGCGAGTTCCAGCATGGGCTTCTCAGGTTCTGAGACAGCTTGCCCCCAATTTATCATACCGCAGCCTTGTTATGTTGGGAATTGCTAGTATTCAGGGATTGCCAGTTGCATCTTTTAATAAAGATGATGCTGAACGCCTCCTTTTCTTTTGTACTAGGCAGGAGAAAGAAAACTGTCCCAATGATCATGTTTTCTCTGGGATTCCAAGTTGGCTGAAACCTCCTCCACCCAGTCGAAAAAGATCTGAACCATGCTCTAGTTCAAAGTCTATTAGTGCTAGTGGCCGGGGAATTGGAGCTATTAGCAGTCATAGACAGAAATTAAATGTTGCTGCAATGAGGCCAATCCCTCATTCTCATAGGCACAAGATTCATCCCTTTTCTGGATTGTCTGATGGTGCAAGATATGATGGAGACCATGGAAAATCCAATCTGCCGCTTGCTCCTATTAAGCATAATGCTTCTGGCTCTTCTTCAGTTACAAATAGGAAATCAGTGACTAACTCATTCCAAGCTCATCAAATCATTTCTTTGAATCCACTACCAATGAAAAAGCATGGTTGTGACAGAGCTCCAATACGAGTTTGCTCAGAGGAGGAATTCCTGAAGGATGTAATGCAGTTTCTGATCCTTCGGGGGCATAATCGTCTAATTCCACCAGGTGGACTTGCTGAGTTCCCTGATGCCATTTTGAATGCAAAACGGCTGGACCTGTTCAACTTGTATAGGGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGAAATGGTATCAATTGGAAAGGGCAAGTTTTCTCAAAGATGCGCAATCATACCATGACAAATAGAATGACTGGTGTTGGCAATACACTCAAAAGACATTATGAAACTTACCTCTTAGAATATGAATTAGCTCATGATGACGTAGATGGAGAGTGCTGCTTGATGTGTCACAGTAGCGCAGCAGGTGACTGGGTGAACTGCGGTGTATGTGGTGAATGGGCTCATTTTGGCTGTGATAGGCGGCAAGGACTTGGAGCATTTAAGGACTATGCTAAAACCGATGGGCTGGAGTACGTTTGTCCTCGCTGCAGCACATTAAAATTCAGTAAAAATCCCAAAAAACTGCAAATGGTTATTAAAAGATCAAACCAAAGTTCACTTTGTCAGAGCAAAATGTACATGACAAGTGTTAGATAGATTTACTTACACATCTGTTGTGCTTGGATCTGTGTCTCTATTGGTAAGGGTAGGTTCTCAGGACTGTAATTGTTTCACTCTAAGTCAAAGCTTTAGAATTTTGACATGCTATTATCACCTCACCTGAGGCATGTGTATTTTATTTTCATAGGTACCTGTACCCGGTACAAAATAGGTCTTGTCTTATACATGGGTACACTTAGAGATGCTCAATGC 2706 0.4209 YWFTLTDPIGVVVWRVWDCAERRKDIDLGPGIFLLISSPSSGFDQLEALGYICIWRSLVMMLHSQGGSRHCSLLAVLSGKSRDIKQKQKQGAASEDQPSYPFPELACSGRLEVKVLIKPTADEVSRVVEQLQPDFVYLQGQWLEDRGEIGSLVWEDFDLSVPEALCGLFSSKLPNTVYLETPKGEKLAEALHNKGVPYTIYWKNEFSKYASSHFRHSFFSVVQSTSSHTWDAFQLALASFRLYCIQNNVLPSNSQKGSGKLGPQIFGIPPNIDVSPSVADTKEEEDSPETISAVKIYDDDVNMRFLVCGVPCTLDACLLGSLEDGLNALLFTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSYAHISLLVSGSPDTCFNDQLLENHIKKELIEKCQLVQAFPNHEQSKSPSSEPRRSASVACGSSVFEVCMRVPAWASQVLRQLAPNLSYRSLVMLGIASIQGLPVASFNKDDAERLLFFCTRQEKENCPNDHVFSGIPSWLKPPPPSRKRSEPCSSSKSISASGRGIGAISSHRQKLNVAAMRPIPHSHRHKIHPFSGLSDGARYDGDHGKSNLPLAPIKHNASGSSSVTNRKSVTNSFQAHQIISLNPLPMKKHGCDRAPIRVCSEEEFLKDVMQFLILRGHNRLIPPGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTMTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLMCHSSAAGDWVNCGVCGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPRCSTLKFSKNPKKLQMVIKRSNQSSLCQSKMYMTSVR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01194 829 MobiDBLite consensus disorder prediction 506 536 - -
Pste2g01194 829 ProSiteProfiles ARID domain profile. 633 737 IPR001606 GO:0003677
Pste2g01194 829 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 737 800 IPR013083 -
Pste2g01194 829 MobiDBLite consensus disorder prediction 520 536 - -
Pste2g01194 829 SMART bright_3 634 738 IPR001606 GO:0003677
Pste2g01194 829 Pfam ARID/BRIGHT DNA binding domain 636 733 IPR001606 GO:0003677
Pste2g01194 829 MobiDBLite consensus disorder prediction 576 600 - -
Pste2g01194 829 SMART ARID_2 630 733 - -
Pste2g01194 829 SUPERFAMILY FYVE/PHD zinc finger 736 802 IPR011011 -
Pste2g01194 829 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 63 809 IPR042293 -
Pste2g01194 829 CDD PHD_ARID4_like 743 794 - -
Pste2g01194 829 CDD ARID 635 733 - -
Pste2g01194 829 Gene3D - 631 736 IPR036431 GO:0003677
Pste2g01194 829 SUPERFAMILY ARID-like 634 748 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01194 Pste-Chr2 12950101 12958554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01194 61 805 ARID Transcription Factor Family AT3G43240 65.909 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pste2g01194 ARID 6.9e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01194 2 12950101 12958554 Pste2g01194 2 12950101 12958554 ECH