Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01192 ATGGCTTCTTCTGATTCCCCTCCTTCTCTCAACGTTGTCGGATACACCCACTCTACTTCTCCACCAAACAACCACCTATCATCACTATCACACATCACTCTCATAACGGTAACTGTCCTCGCCCTCGCCGTAACCGTTTCCTTAGCCTTATACTTCCTTCTCTGTCACCGTAACCGTTTCCTCCGTCATACCTCTCCGTCTCCTTCATCCGCTGCACCTTTCTCCTCCAGCAATCGGATAACGCCGGTTAACGCTTCATCTTCCGTCGCTGATTCTCTCCCTGTGTTCACCTTCTCCTCCGTCACACGGCGCTCAGCCTCCGGAGGCGGCGCCGACTGCGCCGTGTGCTTATCCAAGTTCGAGCAGCACGACGTTCTCCGCTTGCTGCCTCTCTGCTGCCACGCGTTCCACGCCGAATGCATCGACACGTGGTTTCGTTCGAATCTCACGTGTCCGCTCTGCCGATCCGCCGTCGGCGCCACGGACTCCGACCTCGCGAAGGTTTTCCGGTCGTCGTCTATTGCCGGCGGCGACAGCTTCCGGCTGGAGATAGGGAGCATCAGTAGCCGCCGCGGAGAAGCTGCTGCTTCCGCCGGAGAAACGCGCGGAAGGTCCTACACCGTTGGCGCATTCGAATATTTCATCGACGAGGAGGCTGACACTGAGGTTGAGGTTGAGGCTGCGTTCAGTTATGCTCACTGGAGAAGAGTTTCCGGCGAGAAAGAAGACGGTGCTGCGGTGGAGGCTACGGCGGATTCTTTGTCGAACTTAGCTGGTGAGGTTGGGCGCGGTGGAAGTAACAATAACGGTGATGGCTGGTTGAAGGATTATGTGGATTGTCTTTCGAACACGATGTCGTTTCGAAGTTCTGGAAGGTTCTTGTTCACTGGGAGTAGTCGCCGAAGCGACGTCGTTGTTGTGGGAGATTATGATGTTGAAGCGAACCGTTTCGGCGATGAAATCGGTGAAATGTTTCGATGGCTCTCAGGAGTTTGA 996 0.5532 MASSDSPPSLNVVGYTHSTSPPNNHLSSLSHITLITVTVLALAVTVSLALYFLLCHRNRFLRHTSPSPSSAAPFSSSNRITPVNASSSVADSLPVFTFSSVTRRSASGGGADCAVCLSKFEQHDVLRLLPLCCHAFHAECIDTWFRSNLTCPLCRSAVGATDSDLAKVFRSSSIAGGDSFRLEIGSISSRRGEAAASAGETRGRSYTVGAFEYFIDEEADTEVEVEAAFSYAHWRRVSGEKEDGAAVEATADSLSNLAGEVGRGGSNNNGDGWLKDYVDCLSNTMSFRSSGRFLFTGSSRRSDVVVVGDYDVEANRFGDEIGEMFRWLSGV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01192 331 CDD RING-H2_EL5-like 112 155 - -
Pste2g01192 331 SUPERFAMILY RING/U-box 107 160 - -
Pste2g01192 331 Pfam Ring finger domain 112 155 IPR001841 -
Pste2g01192 331 SMART ring_2 113 154 IPR001841 -
Pste2g01192 331 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Pste2g01192 331 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 28 227 - -
Pste2g01192 331 FunFam E3 ubiquitin-protein ligase ATL6 75 161 - -
Pste2g01192 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 160 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01192 Pste-Chr2 12933239 12934234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01192 30 155 C3H Transcription Factor Family AT2G34990 37.500 6.64e-24 98.2